RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 GYPCP04921 128 aa12.58□□□□□ -0.4
DNMT3B-201ENST00000201963 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
DNMT3B-201ENST00000201963 MRPL12P52815 198 aaKnown RBP12.58□□□□□ -0.4
DNMT3B-201ENST00000201963 FYB2Q5VWT5 728 aa12.58□□□□□ -0.4
DNMT3B-201ENST00000201963 FAM133AQ8N9E0 248 aa12.58□□□□□ -0.4
DNMT3B-201ENST00000201963 HACL1Q9UJ83 578 aa12.58□□□□□ -0.4
DNMT3B-201ENST00000201963 TARSL2A2RTX5 802 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 CIAO1O76071 339 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 ELF1P32519 619 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 TAF11Q15544 211 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 TXNRD3Q86VQ6 643 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 CCT8L2Q96SF2 557 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 GGA3Q9NZ52 723 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 FRMD4BQ9Y2L6 1034 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 GUCY1A2P33402 732 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 CRKP46108 304 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 MAGOHP61326 146 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 SLC20A2Q08357 652 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 KCNB2Q92953 911 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 GBP5Q96PP8 586 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 SMARCAL1Q9NZC9 954 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 SPDYE3A6NKU9 549 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 ANGEL2Q5VTE6 544 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 PARP9Q8IXQ6 854 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 RDH13Q8NBN7 331 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 THOC1Q96FV9 657 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 PALMO75781 387 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 LUC7L3O95232 432 aaKnown RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 RASSF2P50749 326 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 MECOMQ03112 1051 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 GRIN1Q05586 938 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 ADAM9Q13443 819 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 RAB3IPQ96QF0 476 aaPredicted RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
DNMT3B-201ENST00000201963 COL3A1P02461 1466 aaPredicted RBP12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 PLEKHA8P1O95397 391 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 SUPT20HL1Q3ZLR7 823 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 ANKRD20A3Q5VUR7 823 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 FMO2Q99518 471 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 YIPF3Q9GZM5 350 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 GEMIN8Q9NWZ8 242 aaKnown RBP12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 CYP2D7A0A087X1C5 515 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 KIF1CO43896 1103 aaKnown RBP12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 MCAMP43121 646 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 NEK8Q86SG6 692 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 SPDL1Q96EA4 605 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 SLC10A4Q96EP9 437 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 ATP6V1G3Q96LB4 118 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 FAM114A2Q9NRY5 505 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 NOP53Q9NZM5 478 aaKnown RBP12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 PACSIN2Q9UNF0 486 aaPredicted RBP12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 NEDD4P46934 1319 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 GCNT3O95395 438 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 PLCG1P19174 1290 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 CXCL9Q07325 125 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 GLE1Q53GS7 698 aaKnown RBP12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 CAPN12Q6ZSI9 719 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 C2orf69Q8N8R5 385 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 DISC1Q9NRI5 854 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 SNX12Q9UMY4 172 aa12.56□□□□□ -0.4
DNMT3B-201ENST00000201963 LSP1P33241 339 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 FKBP3Q00688 224 aaKnown RBP12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 PPP2R5EQ16537 467 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 ZNF473Q8WTR7 871 aaKnown RBP12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 FAM205CA6NFA0 338 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 TXNDC9O14530 226 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 SCARF1Q14162 830 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 CCDC62Q6P9F0 684 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 GPBP1Q86WP2 473 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 FAM167BQ9BTA0 163 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 CNOT10Q9H9A5 744 aaKnown RBP12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 CD248Q9HCU0 757 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 CALUO43852 315 aaPredicted RBP12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 CIB2O75838 187 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 GNA14O95837 355 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 GAS8O95995 478 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 MMEP08473 750 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 LY9Q9HBG7 655 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 AGPAT5Q9NUQ2 364 aa12.55□□□□□ -0.4
DNMT3B-201ENST00000201963 LRRC53A6NM62 1247 aa12.54□□□□□ -0.4
DNMT3B-201ENST00000201963 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms