RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 CIITAP33076 1130 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 MXI1P50539 228 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 RBL2Q08999 1139 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 SPTLC3Q9NUV7 552 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-201ENST00000157600 SNX25Q9H3E2 840 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 MAD1L1Q9Y6D9 718 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 MRGBPQ9NV56 204 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 PAMP19021 973 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 M0R2C6 588 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 CTNND1O60716 968 aaKnown RBP13.55□□□□□ -0.24
LMCD1-201ENST00000157600 FAM167AQ96KS9 214 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 ERBB3P21860 1342 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 ANXA13P27216 316 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 DMTNQ08495 405 aa13.55□□□□□ -0.24
LMCD1-201ENST00000157600 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.55□□□□□ -0.245e-8■■■■■ 65.3
LMCD1-201ENST00000157600 DDX27Q96GQ7 796 aaKnown RBP13.55□□□□□ -0.24
LMCD1-201ENST00000157600 RBM41Q96IZ5 413 aaKnown RBP13.55□□□□□ -0.24
LMCD1-201ENST00000157600 DR1Q01658 176 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 ELMSAN1Q6PJG2 1045 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 MCPH1Q8NEM0 835 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 TBCKQ8TEA7 893 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 EPB41L5Q9HCM4 733 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 OSBPP22059 807 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 MESDQ14696 234 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 FAM196AQ6ZSG2 479 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 CLIC6Q96NY7 704 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 ABCA6Q8N139 1617 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 TCP11Q8WWU5 503 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 CALB1P05937 261 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 TTBK2Q6IQ55 1244 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 EXOC1LA0A1B0GW35 172 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 MAPK13O15264 365 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 HDAC11Q96DB2 347 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 CLGNO14967 610 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
LMCD1-201ENST00000157600 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 SUGCTQ9HAC7 445 aa13.54□□□□□ -0.24
LMCD1-201ENST00000157600 ESYT2A0FGR8 921 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 KRT37O76014 449 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 RAPH1Q70E73 1250 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 PRPF38AQ8NAV1 312 aaKnown RBP13.53□□□□□ -0.24
LMCD1-201ENST00000157600 KCTD6Q8NC69 237 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 TACO1Q9BSH4 297 aaKnown RBP13.53□□□□□ -0.24
LMCD1-201ENST00000157600 GGPS1O95749 300 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 NR1D1P20393 614 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 UNC13DQ70J99 1090 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 TRIM62Q9BVG3 475 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 TLK1Q9UKI8 766 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 SEPT10Q9P0V9 454 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 CEP72Q9P209 647 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 PCDHA13Q9Y5I0 950 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 PFASO15067 1338 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 PLCG1P19174 1290 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 GCKP35557 465 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 NECTIN1Q15223 517 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 SYDE2Q5VT97 1194 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 DPH5Q9H2P9 285 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 RASGRF2O14827 1237 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 PRPSAP2O60256 369 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 SPOUT1Q5T280 376 aaKnown RBP13.53□□□□□ -0.24
LMCD1-201ENST00000157600 ANTXR1Q9H6X2 564 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 GOLGA4Q13439 2230 aaKnown RBP13.53□□□□□ -0.24
LMCD1-201ENST00000157600 CHEK2O96017 543 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 RFX6Q8HWS3 928 aa13.53□□□□□ -0.24
LMCD1-201ENST00000157600 CPSF3Q9UKF6 684 aaKnown RBP13.53□□□□□ -0.24
LMCD1-201ENST00000157600 TBXAS1P24557 533 aaPredicted RBP13.52□□□□□ -0.24
LMCD1-201ENST00000157600 KIRREL3Q8IZU9 778 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.24
LMCD1-201ENST00000157600 PTPN22Q9Y2R2 807 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 KCNJ6P48051 423 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 TRIM72Q6ZMU5 477 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 ENOSF1Q7L5Y1 443 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 UPF3AQ9H1J1 476 aaKnown RBP13.52□□□□□ -0.24
LMCD1-201ENST00000157600 TRIM33Q9UPN9 1127 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.24
LMCD1-201ENST00000157600 PLA2G4BP0C869 781 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 VPS39Q96JC1 886 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 NDE1Q9NXR1 346 aa13.52□□□□□ -0.24
LMCD1-201ENST00000157600 ZSCAN20P17040 1043 aaPredicted RBP13.52□□□□□ -0.25
LMCD1-201ENST00000157600 DHX9Q08211 1270 aaKnown RBP13.52□□□□□ -0.25
LMCD1-201ENST00000157600 IFT88Q13099 833 aa13.52□□□□□ -0.25
LMCD1-201ENST00000157600 KYAT1Q16773 422 aa13.52□□□□□ -0.25
LMCD1-201ENST00000157600 CLEC17AQ6ZS10 378 aa13.52□□□□□ -0.25
LMCD1-201ENST00000157600 NBPF3Q9H094 633 aa13.52□□□□□ -0.25
LMCD1-201ENST00000157600 CYP26B1Q9NR63 512 aa13.52□□□□□ -0.25
LMCD1-201ENST00000157600 ASNSP08243 561 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms