RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 UNC45AQ9H3U1 944 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 KCNH7Q9NS40 1196 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 RNF146Q9NTX7 359 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 HOXC10Q9NYD6 342 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 RGL1Q9NZL6 768 aa15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 ZNF214Q9UL59 606 aaPredicted RBP15.9■□□□□ 0.14
RTFDC1-201ENST00000023939 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 TNNT1P13805 278 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 YBX3P16989 372 aaKnown RBP eCLIP15.89■□□□□ 0.137e-7■■■□□ 15.1
RTFDC1-201ENST00000023939 MRPS9P82933 396 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 CYP4A11Q02928 519 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 GOLGA8FQ08AF8 430 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 GOLGA8DPQ0D2H9 430 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 HERC4Q5GLZ8 1057 aaPredicted RBP15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 SULF1Q8IWU6 871 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 DYDC2Q96IM9 177 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 PPP1R13BQ96KQ4 1090 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 NACC1Q96RE7 527 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 AGO4Q9HCK5 861 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 KCND2Q9NZV8 630 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 FZD1Q9UP38 647 aa15.89■□□□□ 0.13
RTFDC1-201ENST00000023939 NPHP3-ACAD11A0A0J9YXS1 232 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 GAP43P17677 238 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 VGLL4Q14135 290 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 PGM5Q15124 567 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 PTPN14Q15678 1187 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 SLC30A10Q6XR72 485 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 ZC3H3Q8IXZ2 948 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 WNK4Q96J92 1243 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 C16orf45Q96MC5 204 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 CEP63Q96MT8 703 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 REEP2Q9BRK0 252 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 PDCD2LQ9BRP1 358 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 TEX13BQ9BXU2 312 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 BHMT2Q9H2M3 363 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 PXMP2Q9NR77 195 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 TBC1D22BQ9NU19 505 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 PPP1R12BO60237 982 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 FKBP3Q00688 224 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 CTTNQ14247 550 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 LRRC41Q15345 812 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 MIIPQ5JXC2 388 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 CEP135Q66GS9 1140 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 EPM2AIP1Q7L775 607 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 GLIS3Q8NEA6 775 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 ZC3H15Q8WU90 426 aaKnown RBP15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 SCFD1Q8WVM8 642 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 IQCDQ96DY2 449 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 ERGIC2Q96RQ1 377 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 RMDN3Q96TC7 470 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 KCTD10Q9H3F6 313 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 RIPK3Q9Y572 518 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 PAXBP1Q9Y5B6 917 aa15.88■□□□□ 0.13
RTFDC1-201ENST00000023939 GOLGB1Q14789 3259 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 ZSCAN12O43309 604 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 LYPLA2O95372 231 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 CASP14P31944 242 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 MTIF2P46199 727 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 FXR1P51114 621 aaKnown RBP eCLIP15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 TMEM132BQ14DG7 1078 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 BMT2Q1RMZ1 405 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 EDRF1Q3B7T1 1238 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 SNRNP48Q6IEG0 339 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 RINT1Q6NUQ1 792 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 C1orf186Q6ZWK4 172 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 USP50Q70EL3 339 aaPredicted RBP15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 TPH2Q8IWU9 490 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 NUP58Q9BVL2 599 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 RUSC1Q9BVN2 902 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 OLFML3Q9NRN5 406 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 TRMT1Q9NXH9 659 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 COL4A3BPQ9Y5P4 624 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 WDR90Q96KV7 1748 aa15.87■□□□□ 0.13
RTFDC1-201ENST00000023939 GOLGA6L9A6NEM1 432 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 SPDYE16A6NNV3 312 aaPredicted RBP15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 CHMP2AO43633 222 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 GNA14O95837 355 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 PRKCSHP14314 528 aaPredicted RBP15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 MARSP56192 900 aaKnown RBP15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 MTMR1Q13613 665 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 BAATQ14032 418 aaPredicted RBP15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 MAN2A1Q16706 1144 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 VSIG10LQ86VR7 867 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 CREBRFQ8IUR6 639 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 NOC4LQ9BVI4 516 aaKnown RBP15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 FGFBP2Q9BYJ0 223 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 CSADQ9Y600 493 aa15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 POLR2AP24928 1970 aaKnown RBP15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 ZC3H4Q9UPT8 1303 aaKnown RBP15.86■□□□□ 0.13
RTFDC1-201ENST00000023939 B4DLN1 442 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 ADM5C9JUS6 153 aa15.85■□□□□ 0.13
RTFDC1-201ENST00000023939 MAFGO15525 162 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms