RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Tbx22Q8K402 517 aa11.76□□□□□ -0.53
Msh3-202ENSMUST00000185852 MyocdQ8VIM5 935 aa11.76□□□□□ -0.53
Msh3-202ENSMUST00000185852 Med24Q99K74 987 aa11.76□□□□□ -0.53
Msh3-202ENSMUST00000185852 Mrpl11Q9CQF0 192 aaKnown RBP11.76□□□□□ -0.53
Msh3-202ENSMUST00000185852 Pabpc6Q9D4E6 643 aaKnown RBP11.76□□□□□ -0.53
Msh3-202ENSMUST00000185852 Chmp2aQ9DB34 222 aa11.76□□□□□ -0.53
Msh3-202ENSMUST00000185852 RaraP11416 462 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Gad1P48318 593 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 GabpaQ00422 454 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Hdac10Q6P3E7 666 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Mcph1Q7TT79 822 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Znf830Q8R1N0 363 aaKnown RBP11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Apopt1Q9CQW7 192 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 RnmtQ9D0L8 465 aaKnown RBP11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Celf2Q9Z0H4 508 aaKnown RBP11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Als2Q920R0 1651 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Plcg1Q62077 1302 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Vmn2r79E9Q067 851 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Rfpl4bJ3QPR6 266 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Kcnh2O35219 1162 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Adam7O35227 789 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Mtco1P00397 514 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Xrcc6P23475 608 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Syt2P46097 422 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 GartQ64737 1010 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Antxr2Q6DFX2 487 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Cwf19l2Q8BG79 887 aaKnown RBP11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Prkag3Q8BGM7 489 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Ccz1Q8C1Y8 480 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Calhm4Q8CE93 315 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Vmn1r191Q8K4D0 298 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 YarsQ91WQ3 528 aaKnown RBP11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Smco2Q9DA21 347 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Ddx25Q9QY15 484 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Pla2g4aP47713 748 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Irf5P56477 497 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Ppp1r13bQ62415 1087 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Wrap53Q8VC51 532 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Trim66Q924W6 1242 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 1700129C05RikQ9CQ77 218 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Krt20Q9D312 431 aa11.75□□□□□ -0.53
Msh3-202ENSMUST00000185852 Akap11E9Q777 1895 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 SrcapA0A087WQ44 3271 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Mical3Q8CJ19 1993 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Zscan2Q07230 614 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Dpcr1Q3TNW5 500 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Palb2Q3U0P1 1104 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Eif3j1Q3UGC7 261 aaKnown RBP11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 TxlnaQ6PAM1 554 aaKnown RBP11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 NfrkbQ6PIJ4 1296 aaKnown RBP11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Pnma1Q8C1C8 353 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Depdc1aQ8CIG0 804 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Gle1Q8R322 699 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Kcnq4Q9JK97 696 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 SmapQ9R0P4 181 aaKnown RBP11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Atp1a4Q9WV27 1032 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Brwd3A2AHJ4 1799 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Cep290Q6A078 2472 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Shank2Q80Z38 1476 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Ttc38A3KMP2 465 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Fam167bP17257 162 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Mark3Q03141 753 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Mettl14Q3UIK4 456 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Cdc14aQ6GQT0 603 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Tcaf3Q6QR59 914 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Naa15Q80UM3 865 aaKnown RBP11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Tsen34Q8BMZ5 316 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 AtrnQ9WU60 1428 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 EmbP21995 330 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Ric8aQ3TIR3 530 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Nom1Q3UFM5 854 aaKnown RBP11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Krt31Q61765 416 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 KaznQ69ZS8 779 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Bzw2Q91VK1 419 aaKnown RBP11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Akr1c14Q91WT7 323 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Tex19.1Q99MV2 351 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Golph3Q9CRA5 298 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Ifi35Q9D8C4 286 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Zfyve19Q9DAZ9 389 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Pdzd4Q9QY39 772 aa11.74□□□□□ -0.53
Msh3-202ENSMUST00000185852 Map7d1A2AJI0 846 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Gm4307E9PZY4 289 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Olfr552E9Q545 317 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 E9QMW4 1145 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Gm4312K9J7E2 289 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 YdjcQ14BV6 310 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Skap2Q3UND0 358 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Slc9a2Q3ZAS0 814 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Ece1Q4PZA2 769 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Rd3Q8BRE0 195 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 SfpqQ8VIJ6 699 aaKnown RBP11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Vps36Q91XD6 386 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Slc25a38Q91XD8 326 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Serpinb3bQ9D1Q5 387 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Dnajb7Q9QYI8 312 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Psma7Q9Z2U0 248 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Arap3Q8R5G7 1538 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Aknad1E9Q8N6 675 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Hmx1O70218 332 aa11.73□□□□□ -0.53
Msh3-202ENSMUST00000185852 Slc16a2O70324 545 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms