RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Sptlc2P97363 560 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Gm28047Q3US59 414 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Prpf4bQ61136 1007 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Tas2r124Q7M718 309 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Lrrd1Q8C0R9 853 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Xrn2Q9DBR1 951 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Cyp2s1Q9DBX6 501 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Eif2ak1Q9Z2R9 619 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 SktA2AQ25 1946 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Dhx15O35286 795 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Pcdha4O88689 947 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Nap1l2P51860 460 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Actr2P61161 394 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 DSCC1Q14AI0 399 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Mettl14Q3UIK4 456 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Mtss1lQ6P9S0 715 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Fez2Q6TYB5 348 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Bag4Q8CI61 457 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Fam13bQ8K2H3 851 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 OtoaQ8K561 1137 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Cacnb1Q8R3Z5 597 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Olfr397Q8VEZ6 315 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Msgn1Q9JK54 188 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Pex3Q9QXY9 372 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Add3Q9QYB5 706 aaKnown RBP9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Rnf25Q9QZR0 456 aa9.35□□□□□ -0.91
Trim39-205ENSMUST00000173369 Pate3B3GLJ3 98 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 1700122O11RikJ3QPW6 241 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Arhgap1Q5FWK3 439 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Elf1Q60775 612 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Fscn1Q61553 493 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Lrrcc1Q69ZB0 1026 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Usp6nlQ80XC3 819 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Trmt13Q8BYH3 481 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 SowahcQ8C0J6 512 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Zmynd15Q8C0R7 736 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Alas1Q8VC19 642 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Tesk2Q8VCT9 570 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Rassf3Q99P51 232 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Snrnp35Q9D384 244 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Plod3Q9R0E1 741 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Krt85Q9Z2T6 507 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 RptorQ8K4Q0 1335 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Pgap3A2A559 320 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Klhl34A2AI76 644 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Apol7aB2RT54 418 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 NfkbieO54910 364 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Map2k1P31938 393 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 GlrbP48168 496 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Foxd1Q61345 456 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Trak2Q6P9N8 913 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Taco1Q8K0Z7 294 aaKnown RBP9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 CrygnQ8VHL5 183 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Trim11Q99PQ2 467 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Ubxn11Q9D572 484 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Wfdc1Q9ESH5 211 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 GraspQ9JJA9 392 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Kcnq4Q9JK97 696 aa9.34□□□□□ -0.91
Trim39-205ENSMUST00000173369 Magea4F2Z493 315 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Atp9bP98195 1146 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Znf865Q3U3I9 1058 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Gas2l3Q3UWW6 683 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ahcyl2Q68FL4 613 aaKnown RBP9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 NostrinQ6WKZ7 506 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cyp26b1Q811W2 512 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Cyp4f39Q8BGU0 532 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Sun2Q8BJS4 731 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Dennd2aQ8C4S8 1000 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ccar2Q8VDP4 922 aaKnown RBP9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mmtag2Q99LX5 260 aaKnown RBP9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Trim44Q9QXA7 346 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Smim10l2aA0A0B4J1F8 78 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 E030030I06RikJ3QML9 246 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ampd3O08739 766 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mpp3O88910 568 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 PtpreP49446 699 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 4933427I04RikQ3V053 235 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Tp53i13Q5F267 385 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Gpbp1Q6NXH3 473 aaKnown RBP9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Kcnk18Q6VV64 394 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Rassf10Q8BL43 508 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Robo4Q8C310 1012 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Agbl2Q8CDK2 862 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 GneQ91WG8 722 aaKnown RBP9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Trim66Q924W6 1242 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Usp26Q99MX1 835 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mettl7bQ9DD20 244 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Col4a3bpQ9EQG9 624 aa9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Map3k20Q9ESL4 802 aaKnown RBP9.33□□□□□ -0.92
Trim39-205ENSMUST00000173369 Gm7086A0A1W2P766 342 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Mroh8E9PYI4 1049 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Pou2f2Q00196 463 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Pbxip1Q3TVI8 727 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ccdc189Q6NZQ0 333 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Spata7Q80VP2 582 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Nup88Q8CEC0 753 aaKnown RBP9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Smc2Q8CG48 1191 aaKnown RBP9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Ces4aQ8R0W5 563 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 LpxnQ99N69 386 aa9.32□□□□□ -0.92
Trim39-205ENSMUST00000173369 Fmnl1Q9JL26 1094 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 207.4 ms