RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Nmt2O70311 529 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 InhbaQ04998 424 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Churc1Q6DG52 112 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Pspc1Q8R326 523 aaKnown RBP17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Hps3Q91VB4 1002 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Map3k15A2AQW0 1331 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gm4841E9QAA8 417 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Zbed4Q80WQ9 1168 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Arhgap18Q8K0Q5 663 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Cacnb1Q8R3Z5 597 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Spata17Q9D552 379 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Sgk1Q9WVC6 431 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Clcn6O35454 870 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 TxnP10639 105 aaKnown RBP17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Nr2f2P43135 414 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Zbtb39Q6PDK0 712 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Vmn1r191Q8K4D0 298 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Cbwd1Q8VEH6 393 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Q922C1 641 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Dnaaf1Q9D2H9 634 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Rwdd2aQ9D9S3 292 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Dctpp1Q9QY93 170 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Itsn2Q9Z0R6 1659 aa17.32■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Rasgrf1P27671 1262 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Fbxo41Q6NS60 873 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Scfd1Q8BRF7 639 aaKnown RBP17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Basp1Q91XV3 226 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Add3Q9QYB5 706 aaKnown RBP17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Zfp94E9Q6Y4 486 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Aco1P28271 889 aaKnown RBP17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Erp44Q9D1Q6 406 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tmod3Q9JHJ0 352 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Calb1P12658 261 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 DSCC1Q14AI0 399 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Rcor2Q8C796 523 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 AdarQ99MU3 1178 aaKnown RBP17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Trim42Q9D2H5 723 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Zfp408H7BX78 710 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Samhd1Q60710 627 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tll1Q62381 1013 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 OcrlQ6NVF0 900 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ankrd45Q810N6 248 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Slc35f6Q8VE96 372 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Cnpy3Q9DAU1 276 aa17.31■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Gm7995L7N2E4 160 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Fam198bQ3UPI1 517 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Usp50Q6P8X6 390 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 C8aQ8K182 587 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Mrps22Q9CXW2 359 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Krt27Q9Z320 448 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Actn4P57780 912 aaKnown RBP17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 PhexP70669 749 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Trim37Q6PCX9 961 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 BC048507Q80ZS7 89 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Mrpl50Q8VDT9 159 aaKnown RBP17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Rnf14Q9JI90 485 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Casp14O89094 257 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Stmn1P54227 149 aaKnown RBP17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Serpina3bQ8BYY9 420 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Eif4a3Q91VC3 411 aaKnown RBP17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Antxr1Q9CZ52 562 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 TbcbQ9D1E6 244 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Cap1P40124 474 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Irx1P81068 480 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 OtulinQ3UCV8 352 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Znf652Q5DU09 608 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Aldh18a1Q9Z110 795 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Apba2P98084 750 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ces1dQ8VCT4 565 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Mms19Q9D071 1031 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Krt34Q9D646 392 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ccdc182Q9D9C6 152 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Slc12a7Q9WVL3 1083 aa17.3■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tigd5Q499M4 642 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tmem60Q8K174 133 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 PdhbQ9D051 359 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 3830403N18RikQ9D6C3 208 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 1700109H08RikQ9D9C0 210 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ap1m1P35585 423 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Srrm1Q52KI8 946 aaKnown RBP17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Abi1Q8CBW3 481 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Sf3b3Q921M3 1217 aaKnown RBP17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Hoxc10P31257 342 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 ItkQ03526 625 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Skap1Q3UUV5 355 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Meis1Q60954 390 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Fxr1Q61584 677 aaKnown RBP17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Nlrp9bQ66X22 1003 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Tbc1d30Q69ZT9 766 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Trim17Q7TPM3 477 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Mtrf1lQ8BJU9 373 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Ppp4r4Q8C0Y0 875 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Phf20l1Q8CCJ9 1013 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 TprnA2AI08 749 aaKnown RBP17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Elmsan1E9Q2I4 1089 aaKnown RBP17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Psmd14O35593 310 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Hcls1P49710 486 aaKnown RBP17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Aggf1Q7TN31 711 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Taf1dQ9D4V4 322 aa17.29■□□□□ 0.36
Pcdh1-203ENSMUST00000160721 Diaph3Q9Z207 1171 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms