RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Usp8Q80U87 1080 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Znf467Q8JZL0 594 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Amhr2Q8K592 568 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Defb15Q8R2I5 79 aa12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sec63Q8VHE0 760 aaKnown RBP12.64□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Dot1lQ6XZL8 1540 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kif23E9Q5G3 953 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm21962L7N280 338 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Lrrc23O35125 340 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Mgat1P27808 447 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gtpbp6Q3U6U5 514 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Fam81aQ3UXZ6 364 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Zbed4Q80WQ9 1168 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Aldh5a1Q8BWF0 523 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cog5Q8C0L8 829 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Q8VDP2 222 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Xpo5Q924C1 1204 aaKnown RBP12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sgpp1Q9JI99 430 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm45194A0A140LJG2 572 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm45261A0A1B0GSP6 197 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rabgap1A2AWA9 1064 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cyp4f40G3UW81 524 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Taf4bG5E8Z2 855 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 CraddO88843 199 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Calb1P12658 261 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rasgrf1P27671 1262 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sept1P42209 366 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Serpinb6dQ3UWK8 375 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Slc9a2Q3ZAS0 814 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Git1Q68FF6 770 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Hdac4Q6NZM9 1076 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ckap2lQ7TS74 745 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Champ1Q8K327 802 aaKnown RBP12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ero1aQ8R180 464 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 4933428M09RikQ9D3X3 192 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Znf654Q9DAU9 571 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Riok3Q9DBU3 519 aaKnown RBP12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Krt27Q9Z320 448 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 MypnQ5DTJ9 1315 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 DgkkE9Q7N4 1118 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Foxn3Q499D0 457 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tab3Q571K4 716 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Inpp5fQ8CDA1 1132 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 CsadQ9DBE0 493 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ddx25Q9QY15 484 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Noc2lQ9WV70 747 aaKnown RBP12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tns3Q5SSZ5 1440 aa12.63□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Lrrc4bP0C192 709 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 PrphP15331 475 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 NsfP46460 744 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tatdn3Q3U1C6 294 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Uba6Q8C7R4 1053 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tmem134Q8R0J4 195 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Akr1c14Q91WT7 323 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Capn9Q9D805 690 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Mbd5B1AYB6 1498 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Actn4P57780 912 aaKnown RBP12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gpr162Q3UN16 588 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 E4f1Q8CCE9 783 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Spdl1Q923A2 608 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tktl2Q9D4D4 627 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Etnk1Q9D4V0 363 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gins2Q9D600 185 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Mst1rQ62190 1378 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Med14A2ABV5 1459 aaKnown RBP12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ccnyl1D3YUJ3 367 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Alppl2P24823 529 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 LtbrP50284 415 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Lrch1P62046 709 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Klhl14Q69ZK5 630 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 BC048507Q80ZS7 89 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rbm41Q8JZV4 413 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Mtmr6Q8VE11 617 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Pdcd7Q9WTY1 482 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cfap70D3YVL2 1141 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Trim43aQ3TL54 445 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cnga4Q3UW12 575 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sult1d1Q3UZZ6 295 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ezh2Q61188 746 aaKnown RBP12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 VmacQ8BP01 174 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Q8C5C9 218 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Slc26a6Q8CIW6 758 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 AvenQ9D9K3 342 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Slc40a1Q9JHI9 570 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Abcc12Q80WJ6 1366 aa12.62□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cyp3a59D3Z2W7 503 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 GnptabQ69ZN6 1235 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tmem179Q8BHH9 233 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Clasp2Q8BRT1 1286 aaKnown RBP12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Alg3Q8K2A8 438 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 NelfcdQ922L6 591 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cox16Q9CR63 106 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tlr2Q9QUN7 784 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 A0A286YCQ6 122 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Nup62clA2AG10 272 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ttc17E9PVB5 1198 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 4933406M09RikG3XA12 479 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rad51bO35719 350 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Spout1Q3UHX9 385 aaKnown RBP12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Nlrp14Q6B966 993 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms