RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Carmil2Q3V3V9 1296 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Sestd1Q80UK0 696 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Plekhg6Q8R0J1 787 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Taf6lQ8R2K4 616 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Plcb4Q91UZ1 1175 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Eaf2Q91ZD6 262 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Bzw1Q9CQC6 419 aaKnown RBP9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 LrmdaQ9D9B4 229 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Klra10Q9R1G6 266 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Pdcd7Q9WTY1 482 aa9.6□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Scgb2b7D3YYY1 112 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Mfsd4b4J3QNS5 503 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Gna11P21278 359 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Slc27a1Q60714 646 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Zbed4Q80WQ9 1168 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ccdc87Q8CDL9 855 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Tspyl4Q8VD63 406 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Yipf1Q91VU1 306 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ror2Q9Z138 944 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Nup62clA2AG10 272 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Mms22lB1AUR6 1238 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Zfp174B9EJW5 407 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Tcp10bE9PYJ0 438 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Scgb2b19J3QM75 112 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Nedd9O35177 833 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 GpiP06745 558 aaKnown RBP9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Lmnb2P21619 596 aaKnown RBP9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 SpertQ32MG2 446 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Emc10Q3TAS6 258 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Lrrc36Q3V0M2 755 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Cfap52Q5F201 620 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Taok1Q5F2E8 1001 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ces3aQ63880 571 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Arl13bQ640N2 427 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Spata24Q6P926 205 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ces3bQ8VCU1 571 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Usp11Q99K46 921 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Aldh1b1Q9CZS1 519 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 ArpinQ9D0A3 226 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Efhd1Q9D4J1 240 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Cul3Q9JLV5 768 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Cpb1B2RS76 415 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Usp17lbE9Q9U0 468 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Pkn1P70268 946 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 OplahQ8K010 1288 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 SfpqQ8VIJ6 699 aaKnown RBP9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Calml4Q91WQ9 153 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 AticQ9CWJ9 592 aaKnown RBP9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Hsd3b7Q9EQC1 369 aa9.59□□□□□ -0.87
Col28a1-201ENSMUST00000115537 Ephb4P54761 987 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 RalgdsQ03385 852 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem59lQ7TNI2 337 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem60Q8K174 133 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 CerkQ8K4Q7 531 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rrp15Q9CYX7 281 aaKnown RBP9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Prpf40aQ9R1C7 953 aaKnown RBP9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Sclt1G5E861 688 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 MyocO70624 490 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 L1camP11627 1260 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Otud5Q3U2S4 566 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rnf180Q3U827 592 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Kctd1Q5M956 257 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Glra4Q61603 456 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Smarca1Q6PGB8 1046 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 TwistnbQ78WZ7 330 aaKnown RBP9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 QarsQ8BML9 775 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ranbp17Q99NF8 1088 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cep19Q9CQA8 163 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cd274Q9EP73 290 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cul1Q9WTX6 776 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Phlpp1Q8CHE4 1687 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rasal2E9PW37 1286 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Eef2P58252 858 aaKnown RBP9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Smarcad1Q04692 1021 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmed8Q3UHI4 326 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Spout1Q3UHX9 385 aaKnown RBP9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 WaplQ65Z40 1200 aaKnown RBP9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Nme8Q715T0 586 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 SrlQ7TQ48 910 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dnm1lQ8K1M6 742 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Stap2Q8R0L1 411 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Dr1Q91WV0 176 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 4933428M09RikQ9D3X3 192 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Rnf4Q9QZS2 194 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cib2Q9Z309 187 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Impdh2P24547 514 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Ap1m1P35585 423 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Eepd1Q3TGW2 569 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Gm5935Q497S0 212 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Stxbp3Q60770 592 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Zfp341Q6PGC9 846 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tcp10aQ80W76 438 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 H6pdQ8CFX1 789 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Xpo6Q924Z6 1125 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tmem39aQ9CYC3 486 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Tacc2Q9JJG0 1149 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Kif9Q9WV04 790 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cog1Q9Z160 980 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Suclg2Q9Z2I8 433 aa9.58□□□□□ -0.88
Col28a1-201ENSMUST00000115537 Cul4bA2A432 970 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms