RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Gja6Q6S5G4 283 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Asap2Q7SIG6 958 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Bank1Q80VH0 783 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Fam102bQ8BQS4 339 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Wdr11Q8K1X1 1223 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Bst2Q8R2Q8 172 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Slc12a8Q8VI23 705 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Atp5c1Q91VR2 298 aaKnown RBP9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 SharpinQ91WA6 380 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Hdhd5Q91WM2 419 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Pcdhb22Q91XZ8 794 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Pold4Q9CWP8 107 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Speer4f1Q9D5Q6 258 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Lman2Q9DBH5 358 aaKnown RBP9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Myh7bA2AQP0 1941 aa9.44□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Sptbn2Q68FG2 2388 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Gm13941A2AJ38 245 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Dcpp2E9PYC2 171 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 A430078G23RikE9Q7Y4 484 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Dcpp1L7N1X9 171 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Srsf5O35326 269 aaKnown RBP9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 JundP15066 341 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Npr1P18293 1057 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Sash1P59808 1230 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Il1rapl1P59823 695 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Myadml2Q08AU7 307 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Prss55Q14BX2 321 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Gtf2f1Q3THK3 508 aaKnown RBP9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Znf710Q3U288 666 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Spout1Q3UHX9 385 aaKnown RBP9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Rnf224Q3UIW8 156 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ksr2Q3UVC0 959 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Gm11487Q5RIS0 354 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Uimc1Q5U5Q9 727 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Cspg5Q71M36 566 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Brd2Q7JJ13 798 aaKnown RBP9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 BC048507Q80ZS7 89 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Pgm5Q8BZF8 567 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Uhrf1Q8VDF2 782 aaKnown RBP9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 GatmQ9D964 423 aaKnown RBP9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Cxcl11Q9JHH5 100 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Nova1Q9JKN6 507 aaKnown RBP9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Peg12Q9WVA7 283 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 SetxA2AKX3 2646 aa9.43□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Spocd1B1ASB6 936 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Lrrc32G3XA59 663 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Pbx3O35317 434 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ctnnal1O88327 731 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Limk1P53668 647 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Map4k1P70218 827 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Gdf9Q07105 441 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 MyrflQ3UN70 904 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Zbtb45Q52KG4 520 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Asap3Q5U464 904 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 NfkbibQ60778 359 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Glra4Q61603 456 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Edrf1Q6GQV7 1239 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Heatr6Q6P1G0 1184 aaKnown RBP9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Nacc1Q7TSZ8 514 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 PolrmtQ8BKF1 1207 aaKnown RBP9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ccdc60Q8C4J0 545 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ccdc17Q8CE13 565 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 MlphQ91V27 590 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Cyp2c70Q91W64 489 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ak7Q9D2H2 614 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Tekt1Q9DAJ2 418 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Tlr2Q9QUN7 784 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Fbxo16Q9QZM9 334 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Msl3Q9WVG9 525 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Trip11E9Q512 1976 aa9.42□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Xpnpep3B7ZMP1 506 aaKnown RBP9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Fam46aD3Z5S8 447 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Il13ra2O88786 383 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Sap30bpQ02614 308 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Tubal3Q3UX10 446 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Swap70Q6A028 585 aaKnown RBP9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 C6.1alQ7M757 291 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Sestd1Q80UK0 696 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ccdc30Q8BVF4 654 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Polr3glQ8R0C0 218 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Sirt3Q8R104 334 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Vwa5aQ99KC8 793 aaKnown RBP9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Fmnl1Q9JL26 1094 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Col7a1Q63870 2944 aa9.41□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Arhgap4B1AUY3 965 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Gm3252E9PUT9 216 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Gm3468E9QAJ8 216 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Hoxc8P09025 242 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 VwceQ3U515 929 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Mctp2Q5RJH2 878 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ptpn14Q62130 1189 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Srsf1Q6PDM2 248 aaKnown RBP9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Nutm1Q8BHP2 1126 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ago3Q8CJF9 860 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 FastkQ9JIX9 511 aa9.4□□□□□ -0.9
Scn8a-202ENSMUST00000096198 Ank3G5E8K5 1961 aa9.39□□□□□ -0.91
Scn8a-202ENSMUST00000096198 Zbtb21E9Q444 1094 aa9.39□□□□□ -0.91
Scn8a-202ENSMUST00000096198 AunipE9Q6Z5 340 aa9.39□□□□□ -0.91
Scn8a-202ENSMUST00000096198 Gm15448F6PZL4 682 aa9.39□□□□□ -0.91
Scn8a-202ENSMUST00000096198 LdhbP16125 334 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms