RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ugt1a8D3Z748 530 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ugt1a10E9PXN7 530 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Got1P05201 413 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 TxnP10639 105 aaKnown RBP9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cyp2b10P12791 500 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Msh3P13705 1091 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 SelpQ01102 768 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rnf207Q3V3A7 635 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Trappc3lQ4KL14 181 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Kiaa1211Q5PR69 1207 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Adam6bQ6IMH7 756 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Trnp1Q80ZI1 223 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cc2d1bQ8BRN9 848 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Itm2cQ91VK4 269 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Efhd1Q9D4J1 240 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Eya4Q9Z191 616 aa9.66□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gm45194A0A140LJG2 572 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gm5934D3Z4U6 212 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gcnt4E9Q649 455 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cavin1O54724 392 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Col9a2Q07643 688 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cep126Q0VBV7 1103 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Vwa3aQ3UVV9 1148 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Anp32cQ64G17 123 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Recql4Q75NR7 1216 aaKnown RBP9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tmc3Q7TQ69 1130 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pcdhb12Q91Y07 789 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Prpf6Q91YR7 941 aaKnown RBP9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Ivns1abpQ920Q8 642 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Npm3Q9CPP0 175 aaKnown RBP9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Cyp2s1Q9DBX6 501 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Rbp7Q9EPC5 134 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 AmfrQ9R049 643 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Brca1P48754 1812 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 PatjQ63ZW7 1834 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Arhgef10lA2AWP8 1280 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Gjd2O54851 321 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Nmt1O70310 496 aaKnown RBP9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Orc4O88708 433 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 P4hbP09103 509 aaKnown RBP9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Fdxacb1Q3UY23 622 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Adck2Q6NSR3 617 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Entpd3Q8BFW6 529 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Necab1Q8BG18 352 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Sun2Q8BJS4 731 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tmem63cQ8CBX0 802 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Btbd7Q8CFE5 1130 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Tmem134Q8R0J4 195 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 PccaQ91ZA3 724 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Serpinb12Q9D7P9 423 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Pex11aQ9Z211 246 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Sbf2E9PXF8 1872 aa9.65□□□□□ -0.86
Trim39-201ENSMUST00000042717 Col11a1Q61245 1804 aa9.65□□□□□ -0.87
Trim39-201ENSMUST00000042717 Prl2c3P04768 224 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rbm12b2Q66JV4 834 aaKnown RBP9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Oxsr1Q6P9R2 527 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Asnsd1Q8BFS9 627 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pnma1Q8C1C8 353 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tbc1d10cQ8C9V1 444 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tor1aip1Q921T2 595 aaKnown RBP9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 YwhabQ9CQV8 246 aaKnown RBP9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Galnt15Q9D2N8 638 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 CoasyQ9DBL7 563 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ggps1Q9WTN0 300 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Zbtb12Q9Z150 459 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 PhipQ8VDD9 1821 aaKnown RBP9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Gm45208A0A140LJ36 292 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pgap3A2A559 320 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 MtrA6H5Y3 1253 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tmigd3G3X8R9 209 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Apol10bG3X9K7 334 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 B020004C17RikJ3QP07 232 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Actr2P61161 394 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Kcna2P63141 499 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Vgll3P85442 326 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Taf1bP97358 586 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Kcnf1Q7TSH7 493 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nipa1Q8BHK1 323 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 PdgfcQ8CI19 345 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Traf7Q922B6 594 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Gnl2Q99LH1 728 aaKnown RBP9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rnf181Q9CY62 165 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Adgrf4Q9D2L6 698 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Mipol1Q9D9F8 279 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 FibpQ9JI19 357 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ercc4Q9QZD4 917 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tex21Q9R0U9 575 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Extl3Q9WVL6 918 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Cops5O35864 334 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Axin2O88566 840 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Srd5a1Q68FF9 255 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Cdc14aQ6GQT0 603 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Dhx37Q6NZL1 1150 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Kcnk18Q6VV64 394 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Sox30Q8CGW4 782 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pcdha7Q91Y13 937 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ddah1Q9CWS0 285 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Snx10Q9CWT3 201 aa9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Twf2Q9Z0P5 349 aaKnown RBP9.64□□□□□ -0.87
Trim39-201ENSMUST00000042717 Sucla2Q9Z2I9 463 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms