RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rassf2Q8BMS9 326 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Eif4a3Q91VC3 411 aaKnown RBP12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Large1Q9Z1M7 756 aa12.91□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gm28042B7ZCM9 1014 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tgs1Q923W1 853 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Prg3Q9JL95 222 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Ttc38A3KMP2 465 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Psmc5P62196 406 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Nbr1P97432 988 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Zfp251Q6PCX8 632 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Slc51bQ80WK2 128 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Kiaa0391Q8JZY4 584 aaKnown RBP12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Golph3lQ8R088 285 aaKnown RBP12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Setd3Q91WC0 594 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 PccaQ91ZA3 724 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Sh2b1Q91ZM2 756 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Tacc3Q9JJ11 631 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Dnajb7Q9QYI8 312 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Chd2E9PZM4 1827 aaKnown RBP12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Zfp174B9EJW5 407 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Speer4f2E9Q366 295 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Plekha5E9Q6H8 1269 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Myo1aO88329 1043 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Fam89aQ14BJ1 175 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Acot6Q32Q92 419 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cep70Q6IQY5 616 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Retreg2Q6NS82 541 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Fndc3aQ8BX90 1198 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 4921504E06RikQ8CET2 560 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Polr2bQ8CFI7 1174 aaKnown RBP12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Slit2Q9R1B9 1521 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Robo1O89026 1612 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 NalcnQ8BXR5 1738 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Sipa1l1Q8C0T5 1782 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 4933406M09RikG3XA12 479 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gm6121L7MUF1 212 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Art2aP17981 287 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Cyp11b1Q3TG86 501 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Vwa3aQ3UVV9 1148 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Trim37Q6PCX9 961 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Fbxo10Q7TQF2 950 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Polr3eQ9CZT4 710 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Sgpp1Q9JI99 430 aa12.9□□□□□ -0.34
Pcif1-201ENSMUST00000041643 Gm14525B1AZA0 212 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gm2012B1B0R1 212 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Orc4O88708 433 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gm14819Q62478 212 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Mysm1Q69Z66 819 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Dzip3Q7TPV2 1204 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cyp26b1Q811W2 512 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Polr3fQ921X6 316 aa12.9□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Trap1aP19473 224 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Slc7a1Q09143 622 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 E2f8Q58FA4 860 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ppp1r13bQ62415 1087 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ece2Q80Z60 881 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Fbxo44Q8BK26 255 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 SynrgQ5SV85 1306 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ighmbp2P40694 993 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 MmeQ61391 750 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Zbed4Q80WQ9 1168 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Anks1aP59672 1150 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Rbm46P86049 533 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Nr3c2Q8VII8 978 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gins2Q9D600 185 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cdc27A2A6Q5 825 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Arhgap6O54834 987 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Syne3Q4FZC9 975 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Epha7Q61772 998 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tmem63cQ8CBX0 802 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cd209bQ8CJ91 325 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Sh3bp5lQ99LH9 392 aa12.89□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gm6657A0A1B0GRJ3 277 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 MycP01108 439 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tcp1P11983 556 aaKnown RBP12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Pknox2Q8BG99 474 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Abi1Q8CBW3 481 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Them5Q9CQJ0 248 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Ribc1Q9D0B8 379 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Mfap3lQ9D3X9 409 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Mettl7bQ9DD20 244 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Arap3Q8R5G7 1538 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tsga10Q6NY15 697 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Slc5a5Q99PN0 618 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Serpina9Q9D7D2 418 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 IydQ9DCX8 285 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Extl3Q9WVL6 918 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Flvcr1B2RXV4 560 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Man1a2P39098 641 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 PtgdrP70263 357 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Kctd3Q8BFX3 815 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 JmyQ9QXM1 983 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Mtmr1Q9Z2C4 669 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 S100bP50114 92 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Dpcr1Q3TNW5 500 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Thrap3Q569Z6 951 aaKnown RBP12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Arid5bQ8BM75 1188 aaKnown RBP12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Spata32Q8C5V0 334 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gbp1Q01514 589 aa12.88□□□□□ -0.35
Pcif1-201ENSMUST00000041643 TbckQ8BM85 762 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms