RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Senp6Q6P7W0 1132 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Fbxo18Q8K2I9 1042 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Krt20Q9D312 431 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tmem47Q9JJG6 181 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Acot3Q9QYR7 432 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Slc12a7Q9WVL3 1083 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Cog1Q9Z160 980 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Magea1O89006 320 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Magea5O89009 320 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ctdnep1Q3TP92 244 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 LbrQ3U9G9 626 aaKnown RBP10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Q66JV7 365 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 AmphQ7TQF7 686 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Sestd1Q80UK0 696 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Cracr2bQ80ZJ8 394 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Phf20l1Q8CCJ9 1013 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Kcnq3Q8K3F6 873 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Atp5c1Q91VR2 298 aaKnown RBP10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pstpip2Q99M15 334 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Llcfc1Q9D9P8 108 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Magea2Q9R2A2 320 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 4931408C20RikE9PWP9 1381 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 A0A286YCQ6 122 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Mmrn1B2RPV6 1210 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nova2D3YVV7 556 aaKnown RBP10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 IkbkbO88351 757 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pla2g4bP0C871 782 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Atp8a1P70704 1164 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Znf652Q5DU09 608 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ankrd6Q69ZU8 712 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Glis3Q6XP49 780 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Vps37bQ8R0J7 285 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tmem192Q9CXT7 266 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Cst12Q9DAN8 128 aa10.76□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Madcam1Q61826 405 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nlrp4fQ66X05 959 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Churc1Q6DG52 112 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Pacsin2Q9WVE8 486 aaKnown RBP10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Als2Q920R0 1651 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Vmn2r23E9PXI5 849 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Sec24cG3X972 1096 aaKnown RBP10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Actn4P57780 912 aaKnown RBP10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nlrp4cQ3TKR3 982 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Esyt2Q3TZZ7 845 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Mapk4Q6P5G0 583 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 IqceQ6PCQ0 778 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Q8BWG4 1187 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tlcd1Q99JT6 247 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Grtp1Q9D3N8 359 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ccdc182Q9D9C6 152 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Kiaa0232Q80U59 1396 aaKnown RBP10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Frmd7A2AD83 703 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Cpb1B2RS76 415 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Usp17lbE9Q9U0 468 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nsrp1Q5NCR9 542 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Rsad1Q5SUV1 442 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Otop3Q80UF9 577 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Bbs9Q811G0 885 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Serpinb13Q8CDC0 389 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Fermt3Q8K1B8 665 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gm9774A0A0A6YVU8 407 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Clcn6O35454 870 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Eef1bO70251 225 aaKnown RBP10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ca8P28651 291 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gad1P48318 593 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Traf5P70191 558 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Psen2Q61144 448 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Nacc1Q7TSZ8 514 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Haus7Q8BKT8 364 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ccdc68Q8BVC4 333 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Q8C5C9 218 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tmem63cQ8CBX0 802 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Slc35f6Q8VE96 372 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tc2nQ91XT6 489 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Drc3Q9D5E4 523 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tex21Q9R0U9 575 aa10.75□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Scn4aQ9ER60 1841 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Cfap221A9Q751 836 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Apol6B7ZC55 329 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Gm3893E9Q1I1 302 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tpp1O89023 562 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Vat1lQ80TB8 417 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Znf76Q8BMU0 568 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 4930449I24RikQ9D5E3 319 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Krt34Q9D646 392 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Psmc4P54775 418 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Kcnb1Q03717 857 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tfcp2l1Q3UNW5 479 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Vps41Q5KU39 853 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Recql4Q75NR7 1216 aaKnown RBP10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Fnbp1Q80TY0 616 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Ube3cQ80U95 1083 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Iqcb1Q8BP00 598 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Taf4bG5E8Z2 855 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 ClgnP52194 611 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Q3TTJ4 293 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Irak1Q62406 710 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Tmem132dQ76HP3 1097 aa10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 Yars2Q8BYL4 472 aaKnown RBP10.74□□□□□ -0.69
Ldlr-201ENSMUST00000034713 CnstQ8CBC4 711 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms