RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Foxd4Q60688 444 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Fam196bQ6GQV1 535 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Usp50Q6P8X6 390 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Zfp341Q6PGC9 846 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Actn1Q7TPR4 892 aaKnown RBP17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Impg2Q80XH2 1243 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Wdr27Q8C5V5 780 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Eif3cQ8R1B4 911 aaKnown RBP17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Tmed2Q9R0Q3 201 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Gadd45gQ9Z111 159 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Flt4P35917 1363 aa17.9■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Krt36B1AQ75 473 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Vps33bP59016 617 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Arl4aP61213 200 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Skiv2lQ6NZR5 1244 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Gbp9Q8BTS3 619 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Morc2bQ8C5W4 1022 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Cabcoco1Q8CDT7 208 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Stxbp5Q8K400 1152 aaKnown RBP17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Arl2bpQ9D385 163 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Stk32bQ9JJX8 414 aa17.89■□□□□ 0.46
Ubfd1-201ENSMUST00000033158 Cdc27A2A6Q5 825 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cyp11b1Q3TG86 501 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 CrkQ64010 304 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tmtc4Q8BG19 741 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Rbbp5Q8BX09 538 aaKnown RBP17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 SarnpQ9D1J3 210 aaKnown RBP17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Arhgap4B1AUY3 965 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gimap9G3X987 291 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Frmd8Q3UFK8 466 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Q91WD4 421 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 PycardQ9EPB4 193 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Zfp804bA0A0G2JGH6 1343 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tnip3A0A1D5RMN0 279 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Acot6Q32Q92 419 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ctdnep1Q3TP92 244 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Nsmce1Q9D720 266 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Calr3Q9D9Q6 380 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cul7Q8VE73 1689 aa17.89■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Rtel1Q0VGM9 1203 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 OtulinQ3UCV8 352 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Zbtb8osQ505B7 168 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ccz1Q8C1Y8 480 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Spata32Q8C5V0 334 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Pdlim2Q8R1G6 349 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Pspc1Q8R326 523 aaKnown RBP17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 4930449I24RikQ9D5E3 319 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ccdc70Q9D9B0 223 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Llcfc1Q9D9P8 108 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 IkbkbO88351 757 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Slc8a1P70414 970 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Runx2Q08775 607 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Mysm1Q69Z66 819 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Sv2cQ69ZS6 727 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 BcrQ6PAJ1 1270 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Rpa3Q9CQ71 121 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Abcb5B5X0E4 1255 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Plekha5E9Q6H8 1269 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Prr18Q6PAN7 307 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ndufb9Q9CQJ8 179 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Twf2Q9Z0P5 349 aaKnown RBP17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Pabpc1lA2A5N3 607 aaKnown RBP17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ccdc24E9PUW8 296 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Olfr552E9Q545 317 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Aoc3O70423 765 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 RenbpP82343 430 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Slc7a1Q09143 622 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Trmt10cQ3UFY8 414 aaKnown RBP17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Nlrp14Q6B966 993 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 L3mbtl3Q8BLB7 883 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Klhl38Q8BSF5 581 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Ppm1kQ8BXN7 372 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Golph3lQ8R088 285 aaKnown RBP17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tmem134Q8R0J4 195 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Dbndd2Q9CRD4 158 aa17.88■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 GalcP54818 684 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Fam81aQ3UXZ6 364 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Tshz1Q5DTH5 1084 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Slc30a9Q5IRJ6 567 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Kiaa0319Q5SZV5 1081 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Klhl29Q80T74 875 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Lsm14bQ8CGC4 385 aaKnown RBP17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Abcg3Q99P81 650 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 HnrnpcQ9Z204 313 aaKnown RBP17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Adgrb3Q80ZF8 1522 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Gm7356A0A087WSA6 508 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 1700016G14RikA0A286YCZ6 238 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Kcnh2O35219 1162 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Cdh15P33146 784 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Mtrf1lQ8BJU9 373 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Usp15Q8R5H1 981 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Slc35f6Q8VE96 372 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Q922C1 641 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 4921524L21RikQ9D5T2 438 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Acot3Q9QYR7 432 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Sucla2Q9Z2I9 463 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 CoblQ5NBX1 1337 aaKnown RBP17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Taf1bP97358 586 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Vmn1r209Q5NC97 312 aa17.87■□□□□ 0.45
Ubfd1-201ENSMUST00000033158 Adgrg6Q6F3F9 1165 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms