RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ppp3ccP48455 513 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Znf532Q6NXK2 1036 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 4933409G03RikQ8C5U0 320 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Trip10Q8CJ53 603 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Slc12a6Q924N4 1150 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Maged2Q9ER67 616 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tnfrsf10bQ9QZM4 381 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ncoa3O09000 1398 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ext2P70428 718 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Vil1Q62468 827 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Krt72Q6IME9 520 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Rab14Q91V41 215 aaKnown RBP14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Parp14Q2EMV9 1817 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gimd1E9PW74 217 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Nup107Q8BH74 926 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Trpa1Q8BLA8 1125 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Spire2Q8K1S6 718 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Med21Q9CQ39 144 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Arl2bpQ9D385 163 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Phkg2Q9DB30 406 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Dctn3Q9Z0Y1 186 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ppargc1aO70343 797 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Sipa1P46062 1037 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Miga1Q4QQM5 600 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Krt39Q6IFX4 482 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Dnm3Q8BZ98 863 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 CnstQ8CBC4 711 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Cep70Q6IQY5 616 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ddx31Q6NZQ2 687 aaKnown RBP14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Acad11Q80XL6 779 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Bbs7Q8K2G4 715 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Pip4k2cQ91XU3 421 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Rnf112Q96DY5 654 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Glrx3Q9CQM9 337 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tex12Q9CR81 123 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ing2Q9ESK4 281 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Map7d3A2AEY4 876 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Nr2f2P43135 414 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tmod1P49813 359 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tshz2Q68FE9 1030 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ehd2Q8BH64 543 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Lsm14bQ8CGC4 385 aaKnown RBP14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gimap4Q99JY3 219 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Med7Q9CZB6 233 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Angptl2Q9R045 493 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Psma3O70435 255 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Large2Q5XPT3 690 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ahcyl2Q68FL4 613 aaKnown RBP14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 QarsQ8BML9 775 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tbc1d23Q8K0F1 684 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm44G3UW88 330 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Cct7P80313 544 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Kmt5aQ2YDW7 349 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Pcgf5Q3UK78 256 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Setd6Q9CWY3 473 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Pex3Q9QXY9 372 aa14.94□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm21083A0A0G2JFD5 256 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Trim36Q80WG7 729 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Osbpl6Q8BXR9 959 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Cdca7lQ922M5 438 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 PawrQ925B0 333 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Kif14L0N7N1 1674 aaKnown RBP14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Stam2O88811 523 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Cab39Q06138 341 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Impg2Q80XH2 1243 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Bbs9Q811G0 885 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 F13a1Q8BH61 732 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Plekha4Q8VC98 588 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Dmc1Q61880 340 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Aggf1Q7TN31 711 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ccdc90bQ8C3X2 256 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 CpvlQ9D3S9 478 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Scyl3Q9DBQ7 735 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Bub1bQ9Z1S0 1052 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Efcab6Q6P1E8 1516 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Nlrp1bA1Z198 1177 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 TriqkB2B9E1 86 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Sorbs1Q62417 1290 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Washc5Q8C2E7 1159 aaKnown RBP14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ushbp1Q8R370 680 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Thoc1Q8R3N6 657 aaKnown RBP14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Grtp1Q9D3N8 359 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Rwdd2aQ9D9S3 292 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 A0A1W2P6Q8 802 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm9048A0A1W2P7H4 802 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 A0A1W2P7Z8 802 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm9046A0A1W2P855 802 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Slc4a1P04919 929 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Atp11aP98197 1187 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ifit1Q64282 463 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Spata31d1bE9QA57 1361 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Cops2P61202 443 aaKnown RBP14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Bfsp2Q6NVD9 416 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Bend3Q6PAL0 825 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Inpp5fQ8CDA1 1132 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 GlyctkQ8QZY2 523 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Mrfap1Q9CQL7 125 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 BicraF8VPZ9 1578 aa14.93□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ap1m1P35585 423 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Inpp1P49442 396 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms