RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Snap25P60879 206 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Krt86P97861 486 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Spice1Q8C804 860 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Depdc1aQ8CIG0 804 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Atxn7Q8R4I1 867 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lama4P97927 1816 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm28510A0A087WP28 240 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lrrc74aA0A1Y7VMD6 494 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Eif3dO70194 548 aaKnown RBP9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 CnpP16330 420 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Vcam1P29533 739 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Stmn4P63042 189 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mrps31Q61733 384 aaKnown RBP9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Spata24Q6P926 205 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gprasp2Q8BUY8 826 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 GlmnQ8BZM1 596 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Kiaa0391Q8JZY4 584 aaKnown RBP9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Txndc5Q91W90 417 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tacc3Q9JJ11 631 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mkrn1Q9QXP6 481 aa9.26□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm6121L7MUF1 212 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ifnar1P33896 590 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lilrb3P97484 841 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Islr2Q5RKR3 745 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mtfr1lQ9CWE0 289 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tpcn1Q9EQJ0 817 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cpb1B2RS76 415 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gna15P30678 374 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Irak1Q62406 710 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Naa35Q6PHQ8 725 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ints8Q80V86 995 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Nrbp2Q91V36 499 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Extl2Q9ES89 330 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lztfl1Q9JHQ5 299 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Klra10Q9R1G6 266 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rasip1Q3U0S6 961 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ankrd13cQ3UX43 541 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ccdc84Q4VA36 332 aaKnown RBP9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sv2cQ69ZS6 727 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mxd3Q80US8 206 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Usp15Q8R5H1 981 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 4921524L21RikQ9D5T2 438 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Extl3Q9WVL6 918 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ugt1a8D3Z748 530 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ugt1a10E9PXN7 530 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Wnt7aP24383 349 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Pik3r1P26450 724 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mapk6Q61532 720 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tbc1d10cQ8C9V1 444 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Bbs7Q8K2G4 715 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ccdc91Q9D8L5 442 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Fthl17aQ9DAX0 182 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Klra17Q9JMA4 273 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Znf394Q9Z1D9 521 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Vwa3aQ3UVV9 1148 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Adam6bQ6IMH7 756 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Senp6Q6P7W0 1132 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Trim6Q8BGE7 488 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 6820408C15RikQ8BJX2 354 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Arhgef19Q8BWA8 802 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ildr1Q8CBR1 537 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ces4aQ8R0W5 563 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Znf830Q8R1N0 363 aaKnown RBP9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Stard7Q8R1R3 373 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tesk2Q8VCT9 570 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Creb3l3Q91XE9 479 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Serpina9Q9D7D2 418 aa9.25□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Flvcr1B2RXV4 560 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rit2P70425 217 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 D630036H23RikQ3UQD6 204 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cyp2c67Q569X9 491 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Kcnj11Q61743 390 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Retreg2Q6NS82 541 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Acat1Q8QZT1 424 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Oxnad1Q8VE38 311 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Anapc4Q91W96 807 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Med15Q924H2 789 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 IydQ9DCX8 285 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rbp7Q9EPC5 134 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tnip1Q9WUU8 647 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Tnrc6cQ3UHC0 1690 aaKnown RBP9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Rsrc2A2RTL5 376 aaKnown RBP9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gm4297D3YWB7 211 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Pik3caP42337 1068 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Lrrc55Q3UY51 311 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Ccdc125Q5U465 500 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Zfp341Q6PGC9 846 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Cyp26b1Q811W2 512 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Spata21Q8BHW6 681 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Znf827Q505G8 1078 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sh3gl1Q62419 368 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Stxbp2Q64324 593 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Gle1Q8R322 699 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Sgms1Q8VCQ6 419 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Dnajc19Q9CQV7 116 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Stx17Q9D0I4 301 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Mroh9G5E8L9 891 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 AdkP55264 361 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 Polr2fP61219 127 aa9.24□□□□□ -0.93
Sf3b1-201ENSMUST00000027127 MaeaQ4VC33 396 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms