RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	YCP4	P25349	247 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	ADY2	P25613	283 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	PDC6	P26263	563 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	IDH2	P28241	369 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	PRO3	P32263	286 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	SOF1	P33750	489 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	FMP23	P38231	175 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	YKE4	P40544	346 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	EMW1	P42842	904 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	FMP32	P43557	207 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	GPI1	P53306	609 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	AQR1	P53943	586 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	SAE3	P89114	91 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	RHO3	Q00245	231 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	MRPL13	Q02204	264 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	EEB1	Q02891	456 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	GIS1	Q03833	894 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	CRR1	Q05790	422 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	YLR177W	Q06251	628 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	SKG3	Q06315	1026 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SEC39	YLR440C	MCM16	Q12262	181 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	PET20	Q99373	253 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	NHP6B	P11633	99 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	REV1	P12689	985 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	PRE7	P23724	241 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	CHA1	P25379	360 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	MVD1	P32377	396 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	CSG2	P35206	410 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	GEX2	P36173	615 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	DTR1	P38125	572 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	RIB5	P38145	238 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	ECM13	P38195	257 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	AIM3	P38266	947 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	UBP5	P39944	805 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	ICP55	P40051	511 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	AVT6	P40074	448 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	GTT1	P40582	234 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	GZF3	P42944	551 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	FMP33	P46998	180 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YJR096W	P47137	282 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YJR149W	P47177	404 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YGR017W	P53210	297 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YGR126W	P53274	230 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	VPS75	P53853	264 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	MTQ1	P53944	314 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YAT1	P80235	687 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	TIF35	Q04067	274 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	YLR283W	Q05867	314 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	PEX15	Q08215	383 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	CWC2	Q12046	339 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	YLR108C	Q12259	485 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	GLO4	Q12320	285 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YOL159C-A	Q3E769	90 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	HKR1	P41809	1802 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	RPL1A	P0CX43	217 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	RPL1B	P0CX44	217 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	PYC1	P11154	1178 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	INO1	P11986	533 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	URA6	P15700	204 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	ARG1	P22768	420 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	BEM1	P29366	551 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	AAR2	P32357	355 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	CDC13	P32797	924 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	NGR1	P32831	672 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	YKL071W	P36086	256 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	SHE3	P38272	425 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	FAD1	P38913	306 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	LYS9	P38999	446 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	VNX1	P42839	908 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	PRM10	P42946	383 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	ULI1	P43604	169 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YJL016W	P47072	561 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	COS5	P47187	383 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	ORC5	P50874	479 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	NQM1	P53228	333 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	COS1	P53822	381 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	APM1	Q00776	475 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	DYN2	Q02647	92 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YPL034W	Q03083	165 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	ADI1	Q03677	179 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	OST6	Q03723	332 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YDR306C	Q06640	478 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	FMP45	Q07651	309 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	GUD1	Q07729	489 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	YOR214C	Q12282	236 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	TIF6	Q12522	245 aa	Known RBP	4.85	□□□□□ -1.63
SEC39	YLR440C	NBL1	Q3E7Y6	73 aa		4.85	□□□□□ -1.63
SEC39	YLR440C	TOM1	Q03280	3268 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	VPS63	O13549	108 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	YOR304C-A	O14468	76 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	CDC28	P00546	298 aa	Known RBP	4.84	□□□□□ -1.63
SEC39	YLR440C	SCH9	P11792	824 aa	Known RBP	4.84	□□□□□ -1.63
SEC39	YLR440C	TOP3	P13099	656 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	SDH2	P21801	266 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	YCL068C	P25593	260 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	PPA2	P28239	310 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	PRR1	P28708	518 aa		4.84	□□□□□ -1.63
SEC39	YLR440C	HRR25	P29295	494 aa	Known RBP	4.84	□□□□□ -1.63
SEC39	YLR440C	MF(ALPHA)2	P32435	120 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms