RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	HACL1	Q9UJ83	578 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	PCOLCE2	Q9UKZ9	415 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	ATP6V0A2	Q9Y487	856 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	PTCH2	Q9Y6C5	1203 aa		7.84	□□□□□ -1.15
CASC19-238	ENST00000641523	CCDC88A	Q3V6T2	1871 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	ANP32C	O43423	234 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	PEX14	O75381	377 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	MAP4K4	O95819	1239 aa	Predicted RBP	7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	FAM153B	P0C7A2	387 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	GRAP	Q13588	217 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	BBS9	Q3SYG4	887 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	CCDC181	Q5TID7	509 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	CCDC30	Q5VVM6	783 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	ARMCX6	Q7L4S7	300 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	NIM1K	Q8IY84	436 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	DNAJC5G	Q8N7S2	189 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	GRAPL	Q8TC17	118 aa	Predicted RBP	7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	SPATA9	Q9BWV2	254 aa		7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	TAF1D	Q9H5J8	278 aa	Predicted RBP	7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	NOP53	Q9NZM5	478 aa	Known RBP	7.83	□□□□□ -1.16
CASC19-238	ENST00000641523	SNED1	Q8TER0	1413 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	CACNA1S	Q13698	1873 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	SCN4A	P35499	1836 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	ABCC4	O15439	1325 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	SART1	O43290	800 aa	Known RBP	7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	PPIP5K2	O43314	1243 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	CLEC3A	O75596	197 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	USP11	P51784	963 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	KRT24	Q2M2I5	525 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	CDPF1	Q6NVV7	123 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	DPP8	Q6V1X1	898 aa	Predicted RBP	7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	SP8	Q8IXZ3	490 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	PPP1R13L	Q8WUF5	828 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	ZNF669	Q96BR6	464 aa	Predicted RBP	7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	ACSS3	Q9H6R3	686 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	SUSD2	Q9UGT4	822 aa		7.82	□□□□□ -1.16
CASC19-238	ENST00000641523	IL16	Q14005	1332 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	CDHR2	Q9BYE9	1310 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	ZNF541	Q9H0D2	1346 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	LRIG2	O94898	1065 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	GLB1	P16278	677 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	EPHX2	P34913	555 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	OLFM4	Q6UX06	510 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	LENG1	Q96BZ8	264 aa	Predicted RBP	7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	ISCA1	Q9BUE6	129 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	STK31	Q9BXU1	1019 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	RTFDC1	Q9BY42	306 aa	Predicted RBP	7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	DAGLA	Q9Y4D2	1042 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	ANKRD36C	Q5JPF3	1778 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	PCNT	O95613	3336 aa		7.81	□□□□□ -1.16
CASC19-238	ENST00000641523	RBAK-RBAKDN	I3L0D1	243 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	GAS2	O43903	313 aa	Known RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	EPHX1	P07099	455 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	NFIC	P08651	508 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	NEXN	Q0ZGT2	675 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	TNIP1	Q15025	636 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	SF3B3	Q15393	1217 aa	Known RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	TKFC	Q3LXA3	575 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	SV2C	Q496J9	727 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	C16orf86	Q6ZW13	317 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	PODN	Q7Z5L7	613 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	BEND7	Q8N7W2	519 aa	Predicted RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	CCDC191	Q8NCU4	936 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	RIN3	Q8TB24	985 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	FBLIM1	Q8WUP2	373 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	UBL7	Q96S82	380 aa	Predicted RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	EPN3	Q9H201	632 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	IRS4	O14654	1257 aa	Predicted RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	TCERG1	O14776	1098 aa	Known RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	ADCY3	O60266	1144 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	LOR	P23490	312 aa	Predicted RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	IREB2	P48200	963 aa	Known RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	GYS2	P54840	703 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	KIAA2012	Q0VF49	1180 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	RNF187	Q5TA31	235 aa	Predicted RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	DCAF15	Q66K64	600 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	CDH24	Q86UP0	819 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	CCDC144CP	Q8IYA2	1237 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	MFSD2A	Q8NA29	543 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	WFDC12	Q8WWY7	111 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	FGD4	Q96M96	766 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	APBA2	Q99767	749 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	MIPEP	Q99797	713 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	HAUS7	Q99871	368 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	CEP131	Q9UPN4	1083 aa		7.8	□□□□□ -1.16
CASC19-238	ENST00000641523	DYNC1LI2	O43237	492 aa	Predicted RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	PCCA	P05165	728 aa	Predicted RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	SPATA31C1	P0DKV0	1188 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	IBSP	P21815	317 aa	Predicted RBP	7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	COL8A1	P27658	744 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	NOS3	P29474	1203 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	ANAPC15	P60006	121 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	AOC3	Q16853	763 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	CCDC152	Q4G0S7	254 aa		7.79	□□□□□ -1.16
CASC19-238	ENST00000641523	SGO2	Q562F6	1265 aa		7.79	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms