RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TTMPQ5BVD1 217 aa18.26■□□□□ 0.51
HNRNPU-228ENST00000640306 FAM26FQ5R3K3 315 aa18.26■□□□□ 0.51
HNRNPU-228ENST00000640306 SFMBT2Q5VUG0 894 aa18.26■□□□□ 0.51
HNRNPU-228ENST00000640306 DDX25Q9UHL0 483 aaKnown RBP18.26■□□□□ 0.51
HNRNPU-228ENST00000640306 PPP1R11O60927 126 aaPredicted RBP18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 SEMA3FQ13275 785 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 PDCLQ13371 301 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 ASTE1Q2TB18 679 aaPredicted RBP18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 SLC9C1Q4G0N8 1177 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 KCTD1Q719H9 257 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 KRT12Q99456 494 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 RAB34Q9BZG1 259 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 KIAA1024Q9UPX6 916 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 HEXIM1O94992 359 aaKnown RBP18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 EPHB4P54760 987 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 RHBDL3P58872 404 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 CCDC43Q96MW1 224 aaKnown RBP18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 ZIM3Q96PE6 472 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
HNRNPU-228ENST00000640306 A0A087X0T9 212 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 POTEB3A0JP26 581 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 POTECB2RU33 542 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 HSF2BPO75031 334 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 FAM228BP0C875 321 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 ACTN1P12814 892 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 RFC4P35249 363 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 STAT3P40763 770 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 FKBP3Q00688 224 aaKnown RBP18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 KIAA0753Q2KHM9 967 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 HERC4Q5GLZ8 1057 aaPredicted RBP18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 POTEBQ6S5H4 581 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 KLHL7Q8IXQ5 586 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 HAS1Q92839 578 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 DNAJC19Q96DA6 116 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 ZEB2O60315 1214 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 LCA5LO95447 670 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 CORO7P57737 925 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 CFAP221Q4G0U5 840 aa18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
HNRNPU-228ENST00000640306 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.24■□□□□ 0.513e-7■□□□□ 11.1
HNRNPU-228ENST00000640306 GPR75-ASB3A0A0A6YYF3 556 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L15C9J2P7 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L13C9JLJ4 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L11C9JVI0 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L18D6R9N7 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L22D6RA61 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L17D6RBQ6 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L19D6RCP7 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L20D6RJB6 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 MPHOSPH10O00566 681 aaKnown RBP18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 MAGEA9P43362 315 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L24Q0WX57 530 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L6PQ6QN14 398 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 ADGRF4Q8IZF3 695 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 CNBD1Q8NA66 436 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 PCDHA12Q9UN75 941 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 EPS15P42566 896 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 COBLL1Q53SF7 1204 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
HNRNPU-228ENST00000640306 USP17L10C9JJH3 530 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 RIMBP2O15034 1052 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 KRT18P05783 430 aaKnown RBP18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 PRLRP16471 622 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 LIG3P49916 1009 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 PPFIA1Q13136 1202 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 MICALL1Q8N3F8 863 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 KLHL30Q0D2K2 578 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 PLCD3Q8N3E9 789 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 CENPHQ9H3R5 247 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 C6orf229H3BNL8 230 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 TTC31Q49AM3 519 aaPredicted RBP18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 TMEM119Q4V9L6 283 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 TRAPPC3LQ5T215 181 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 GPBP1Q86WP2 473 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 CEP72Q9P209 647 aa18.22■□□□□ 0.51
HNRNPU-228ENST00000640306 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 MEIS1O00470 390 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 PJA2O43164 708 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 GTF2IP78347 998 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 IQCDQ96DY2 449 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 GRIN2DO15399 1336 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 ESYT2A0FGR8 921 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 SHOX2O60902 331 aaPredicted RBP18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 SERPING1P05155 500 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 PDIA5Q14554 519 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 ZCWPW2Q504Y3 356 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 EMBQ6PCB8 327 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 BCAS3Q9H6U6 928 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 BMP2KQ9NSY1 1161 aaPredicted RBP18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
HNRNPU-228ENST00000640306 SSU72P8A0A1W2PR75 194 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 OPA1O60313 960 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 SNAP25P60880 206 aa18.2■□□□□ 0.5
HNRNPU-228ENST00000640306 NNTQ13423 1086 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms