RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	POTEG	Q6S5H5	508 aa		11.73	□□□□□ -0.53
NECAP1-223	ENST00000640091	LARP4B	Q92615	738 aa	Known RBP	11.73	□□□□□ -0.53
NECAP1-223	ENST00000640091	MMP19	Q99542	508 aa		11.73	□□□□□ -0.53
NECAP1-223	ENST00000640091	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.73	□□□□□ -0.53
NECAP1-223	ENST00000640091	TEKT3	Q9BXF9	490 aa		11.73	□□□□□ -0.53
NECAP1-223	ENST00000640091	SORBS3	O60504	671 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	SLITRK3	O94933	977 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	SSB	P05455	408 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	RPA1	P27694	616 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	ALDH5A1	P51649	535 aa	Predicted RBP	11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	PPP2R5C	Q13362	524 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	MORC3	Q14149	939 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	TMEM119	Q4V9L6	283 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	HAUS3	Q68CZ6	603 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	SV2B	Q7L1I2	683 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	EEPD1	Q7L9B9	569 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	NIPA1	Q7RTP0	329 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	TPH2	Q8IWU9	490 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	FAM133A	Q8N9E0	248 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	DNER	Q8NFT8	737 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	ERMN	Q8TAM6	284 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	RAD54L	Q92698	747 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	ZIC5	Q96T25	663 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	RIT2	Q99578	217 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	CUEDC2	Q9H467	287 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	MROH8	Q9H579	483 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	TLL2	Q9Y6L7	1015 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	ZBTB39	O15060	712 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	FCER1A	P12319	257 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	SEMA3F	Q13275	785 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	IQCB1	Q15051	598 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	STXBP2	Q15833	593 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	HYI	Q5T013	277 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	XRRA1	Q6P2D8	792 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	DYM	Q7RTS9	669 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	DYDC2	Q96IM9	177 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	INPP4A	Q96PE3	977 aa	Predicted RBP	11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	GSDMA	Q96QA5	445 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	PARK7	Q99497	189 aa	Known RBP	11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	HSD17B14	Q9BPX1	270 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	NT5C3A	Q9H0P0	336 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	CPA4	Q9UI42	421 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091		A0A0G2JMZ2	1700 aa		11.72	□□□□□ -0.53
NECAP1-223	ENST00000640091	MYMK	A6NI61	221 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	FAM155A	B1AL88	458 aa	Predicted RBP	11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	RPN1	P04843	607 aa	Known RBP	11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	GCLC	P48506	637 aa	Predicted RBP	11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	B3GNT9	Q6UX72	402 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	SEPT14	Q6ZU15	432 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	NLRX1	Q86UT6	975 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	DHX40	Q8IX18	779 aa	Known RBP	11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	IWS1	Q96ST2	819 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	TRIM9	Q9C026	710 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	NAT10	Q9H0A0	1025 aa	Known RBP	11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	STK17A	Q9UEE5	414 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	ADD3	Q9UEY8	706 aa	Known RBP	11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	SAMM50	Q9Y512	469 aa		11.71	□□□□□ -0.53
NECAP1-223	ENST00000640091	KDM3A	Q9Y4C1	1321 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	MANSC4	A6NHS7	340 aa	Predicted RBP	11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	TMEM88B	A6NKF7	163 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	BECN2	A8MW95	431 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	EIF3J	O75822	258 aa	Known RBP	11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	TOMM70	O94826	608 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	SLC10A3	P09131	477 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	CCNA1	P78396	465 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	AMPD3	Q01432	767 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	SP2	Q02086	613 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	AOPEP	Q8N6M6	819 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	BANK1	Q8NDB2	785 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	PIGO	Q8TEQ8	1089 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	GPRASP2	Q96D09	838 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	MAF1	Q9H063	256 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	TBC1D22B	Q9NU19	505 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	MAPK8IP1	Q9UQF2	711 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	TELO2	Q9Y4R8	837 aa		11.71	□□□□□ -0.54
NECAP1-223	ENST00000640091	DNAJC25-GNG10	A0A024R161	153 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	AP5Z1	O43299	807 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	KLRC4	O43908	158 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	CAVIN2	O95810	425 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	PLA2G4B	P0C869	781 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	CD44	P16070	742 aa	Known RBP	11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	COPB2	P35606	906 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	ASIC1	P78348	528 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	SP4	Q02446	784 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	PDE4D	Q08499	809 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	RAD51AP2	Q09MP3	1159 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	KMT5B	Q4FZB7	885 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	MIER3	Q7Z3K6	550 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	TRIML1	Q8N9V2	468 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	SHCBP1	Q8NEM2	672 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	DDX12P	Q92771	950 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	FGD4	Q96M96	766 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	C7orf25	Q9BPX7	421 aa		11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.7	□□□□□ -0.54
NECAP1-223	ENST00000640091	MORF4L1	Q9UBU8	362 aa		11.7	□□□□□ -0.54

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