RNA–Protein interactions for RNA: ENST00000638853.1

PAX6-241, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-241ENST00000638853 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
PAX6-241ENST00000638853 NSUN3Q9H649 340 aaKnown RBP13.5□□□□□ -0.25
PAX6-241ENST00000638853 DDX41Q9UJV9 622 aaKnown RBP13.5□□□□□ -0.25
PAX6-241ENST00000638853 BAZ2BQ9UIF8 2168 aaKnown RBP13.49□□□□□ -0.25
PAX6-241ENST00000638853 ATG2AQ2TAZ0 1938 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 B4DLN1 442 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 E7EWF7 191 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 ZBTB5O15062 677 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 SGSM2O43147 1006 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 GH1P01241 217 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 CASTP20810 708 aaKnown RBP13.49□□□□□ -0.25
PAX6-241ENST00000638853 LTBRP36941 435 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 MRPL12P52815 198 aaKnown RBP13.49□□□□□ -0.25
PAX6-241ENST00000638853 ANTXR2P58335 489 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 GHRHRQ02643 423 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 PTK7Q13308 1070 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 GRM4Q14833 912 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 SMAD2Q15796 467 aaKnown RBP13.49□□□□□ -0.25
PAX6-241ENST00000638853 STXBP2Q15833 593 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 CLUL1Q15846 466 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
PAX6-241ENST00000638853 HERC4Q5GLZ8 1057 aaPredicted RBP13.49□□□□□ -0.25
PAX6-241ENST00000638853 IER5LQ5T953 404 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 ARHGEF16Q5VV41 709 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 MCF2L2Q86YR7 1114 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 TMEM192Q8IY95 271 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
PAX6-241ENST00000638853 PIGSQ96S52 555 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 ALG1Q9BT22 464 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 AMNQ9BXJ7 453 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 RIOX1Q9H6W3 641 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
PAX6-241ENST00000638853 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
PAX6-241ENST00000638853 EIF3JO75822 258 aaKnown RBP13.48□□□□□ -0.25
PAX6-241ENST00000638853 HOXA13P31271 388 aaPredicted RBP13.48□□□□□ -0.25
PAX6-241ENST00000638853 PSEN2P49810 448 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 PTPN5P54829 565 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 ZNF200P98182 395 aaPredicted RBP13.48□□□□□ -0.25
PAX6-241ENST00000638853 TROAPQ12815 778 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
PAX6-241ENST00000638853 DGKDQ16760 1214 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 RNF135Q8IUD6 432 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 DBF4BQ8NFT6 615 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 IL31RAQ8NI17 732 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 IGDCC4Q8TDY8 1250 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 YME1L1Q96TA2 773 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 POP1Q99575 1024 aaKnown RBP13.48□□□□□ -0.25
PAX6-241ENST00000638853 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
PAX6-241ENST00000638853 KIAA1217Q5T5P2 1943 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 RALGAPA2Q2PPJ7 1873 aa13.48□□□□□ -0.25
PAX6-241ENST00000638853 EMSYQ7Z589 1322 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 CFAP54Q96N23 3096 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 TECTAO75443 2155 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 SP2Q02086 613 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 MFSD10Q14728 455 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 KIAA0753Q2KHM9 967 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 VSIG10LQ86VR7 867 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 EDAQ92838 391 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 GPKOWQ92917 476 aaPredicted RBP eCLIP13.47□□□□□ -0.25
PAX6-241ENST00000638853 PDCD2LQ9BRP1 358 aa13.47□□□□□ -0.25
PAX6-241ENST00000638853 MBTPS2O43462 519 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 NCK2O43639 380 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 SORBS3O60504 671 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 UPP2O95045 317 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 ZNF286BP0CG31 522 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 MYCLP12524 364 aaPredicted RBP13.46□□□□□ -0.25
PAX6-241ENST00000638853 DLX2Q07687 328 aaPredicted RBP13.46□□□□□ -0.25
PAX6-241ENST00000638853 TRDNQ13061 729 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 HIC1Q14526 733 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 CTC1Q2NKJ3 1217 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 HOMER1Q86YM7 354 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 MB21D2Q8IYB1 491 aaPredicted RBP13.46□□□□□ -0.25
PAX6-241ENST00000638853 RUFY2Q8WXA3 655 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 EMID1Q96A84 441 aaPredicted RBP13.46□□□□□ -0.25
PAX6-241ENST00000638853 PBXIP1Q96AQ6 731 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 KATNAL1Q9BW62 490 aa13.46□□□□□ -0.25
PAX6-241ENST00000638853 COL4A6Q14031 1691 aa13.46□□□□□ -0.26
PAX6-241ENST00000638853 KMT2EQ8IZD2 1858 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 HAS3O00219 553 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 F2P00734 622 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 THPOP40225 353 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 TCF15Q12870 199 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 WTAPQ15007 396 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 PGM5Q15124 567 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 PLEKHG4Q58EX7 1191 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 MYSM1Q5VVJ2 828 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 BMP8AQ7Z5Y6 402 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 SKAP1Q86WV1 359 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 DHX37Q8IY37 1157 aaKnown RBP13.45□□□□□ -0.26
PAX6-241ENST00000638853 NCOA7Q8NI08 942 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 PIBF1Q8WXW3 757 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 TOP1MTQ969P6 601 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 PRRX2Q99811 253 aa13.45□□□□□ -0.26
PAX6-241ENST00000638853 RBM8AQ9Y5S9 174 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms