RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
SCARB2-213ENST00000638680 GGCXP38435 758 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 C6orf118Q5T5N4 469 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 TADA2BQ86TJ2 420 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 ZNF804BA4D1E1 1349 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 CNGA1P29973 690 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 DOK7Q18PE1 504 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 MRPL46Q9H2W6 279 aaKnown RBP20.01■□□□□ 0.79
SCARB2-213ENST00000638680 TRPA1O75762 1119 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 ELAC2Q9BQ52 826 aaKnown RBP20.01■□□□□ 0.79
SCARB2-213ENST00000638680 TUBB6Q9BUF5 446 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 XAB2Q9HCS7 855 aaKnown RBP20.01■□□□□ 0.79
SCARB2-213ENST00000638680 EPS15L1Q9UBC2 864 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 CCPG1Q9ULG6 757 aa20.01■□□□□ 0.79
SCARB2-213ENST00000638680 USP27XA6NNY8 438 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 HSPA2P54652 639 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 BASP1P80723 227 aaKnown RBP20■□□□□ 0.79
SCARB2-213ENST00000638680 IL1RL1Q01638 556 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 IFRD2Q12894 506 aaPredicted RBP20■□□□□ 0.79
SCARB2-213ENST00000638680 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
SCARB2-213ENST00000638680 CCDC144BQ3MJ40 725 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 SESTD1Q86VW0 696 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 BAG5Q9UL15 447 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 SKIP12755 728 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 KIAA0825Q8IV33 1275 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 PPIP5K2O43314 1243 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 PLS3P13797 630 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 SLC16A2P36021 539 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 CASP2P42575 452 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 ATP10DQ9P241 1426 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 TOM1L1O75674 476 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 ADCY2Q08462 1091 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 PSMD2Q13200 908 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 GSPT2Q8IYD1 628 aaKnown RBP20■□□□□ 0.79
SCARB2-213ENST00000638680 COA7Q96BR5 231 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 ADPGKQ9BRR6 497 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 DNAJC17Q9NVM6 304 aaKnown RBP20■□□□□ 0.79
SCARB2-213ENST00000638680 GOLGA8SH3BPF8 625 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 MCF2LO15068 1137 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 ACTN1P12814 892 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 ABCB5Q2M3G0 1257 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 SLFNL1Q499Z3 407 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 MCUQ8NE86 351 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 ABHD10Q9NUJ1 306 aa20■□□□□ 0.79
SCARB2-213ENST00000638680 SEPT9Q9UHD8 586 aaPredicted RBP20■□□□□ 0.79
SCARB2-213ENST00000638680 MMS22LQ6ZRQ5 1243 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 CCDC68Q9H2F9 335 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 ZNF408Q9H9D4 720 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 PRPSAP1Q14558 356 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 NAA30Q147X3 362 aaPredicted RBP19.99■□□□□ 0.79
SCARB2-213ENST00000638680 GPATCH4Q5T3I0 446 aaKnown RBP19.99■□□□□ 0.79
SCARB2-213ENST00000638680 NUGGCQ68CJ6 796 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 GOLGA8QA0A0J9YX86 632 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 GOLGA8OA6NCC3 632 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 GOLGA8NF8WBI6 632 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 SASH1O94885 1247 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 ACSL3O95573 720 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 GCFC2P16383 781 aaKnown RBP19.99■□□□□ 0.79
SCARB2-213ENST00000638680 HDLBPQ00341 1268 aaKnown RBP19.99■□□□□ 0.79
SCARB2-213ENST00000638680 PTPN12Q05209 780 aaKnown RBP19.99■□□□□ 0.79
SCARB2-213ENST00000638680 GJB4Q9NTQ9 266 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 GDAQ9Y2T3 454 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 FGGP02679 453 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 HACE1Q8IYU2 909 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 SLC17A8Q8NDX2 589 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 PAGR1Q9BTK6 254 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 ANGPTL2Q9UKU9 493 aa19.99■□□□□ 0.79
SCARB2-213ENST00000638680 PALMO75781 387 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.98■□□□□ 0.79
SCARB2-213ENST00000638680 ADAMTS1Q9UHI8 967 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 TTLL1O95922 423 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 AS3MTQ9HBK9 375 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 YEATS2Q9ULM3 1422 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 MMEP08473 750 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 PLA2G4BP0C869 781 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 STX1BP61266 288 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 DARS2Q6PI48 645 aaKnown RBP19.98■□□□□ 0.79
SCARB2-213ENST00000638680 SPICE1Q8N0Z3 855 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 DACT3Q96B18 629 aaPredicted RBP19.98■□□□□ 0.79
SCARB2-213ENST00000638680 CFAP36Q96G28 342 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 NIM1KQ8IY84 436 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 CACYBPQ9HB71 228 aaKnown RBP19.98■□□□□ 0.79
SCARB2-213ENST00000638680 KMT5AQ9NQR1 393 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 ESRRAP11474 423 aaPredicted RBP19.98■□□□□ 0.79
SCARB2-213ENST00000638680 CCHCR1Q8TD31 782 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 ABTB1Q969K4 478 aaPredicted RBP19.98■□□□□ 0.79
SCARB2-213ENST00000638680 NRBP2Q9NSY0 501 aa19.98■□□□□ 0.79
SCARB2-213ENST00000638680 SEMA3EO15041 775 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 SPDYE16A6NNV3 312 aaPredicted RBP19.97■□□□□ 0.79
SCARB2-213ENST00000638680 MAPK13O15264 365 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 SPDYE2Q495Y8 402 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 GLE1Q53GS7 698 aaKnown RBP19.97■□□□□ 0.79
SCARB2-213ENST00000638680 OATP04181 439 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 LRRC63Q05C16 580 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 ALKBH5Q6P6C2 394 aaKnown RBP19.97■□□□□ 0.79
SCARB2-213ENST00000638680 MAML1Q92585 1016 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 MRPL47Q9HD33 250 aaKnown RBP19.97■□□□□ 0.79
SCARB2-213ENST00000638680 ANLNQ9NQW6 1124 aa19.97■□□□□ 0.79
SCARB2-213ENST00000638680 MAGED2Q9UNF1 606 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms