RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 PPM1FP49593 454 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-208ENST00000638372 SNX16P57768 344 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 PSMD2Q13200 908 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 ITPK1Q13572 414 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 TTC31Q49AM3 519 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-208ENST00000638372 KAZNQ674X7 775 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 TAOK1Q7L7X3 1001 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 CTAGE3PQ8IX95 158 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 TDP2O95551 362 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 P4HA1P13674 534 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 PIK3CAP42336 1068 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 MRPS25P82663 173 aaKnown RBP15.65■□□□□ 0.1
SCARB2-208ENST00000638372 MAGOHBQ96A72 148 aaKnown RBP15.65■□□□□ 0.1
SCARB2-208ENST00000638372 GJD4Q96KN9 370 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-208ENST00000638372 ADGRB1O14514 1584 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 GOLGA8IPA6NC78 632 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 GOLGA8JA6NMD2 632 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 ORC4O43929 436 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 ECE2O60344 883 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 USP14P54578 494 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 GNGT1P63211 74 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 TOGARAM2Q6ZUX3 1019 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 NEDD1Q8NHV4 660 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 MAIP1Q8WWC4 291 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 ACCSQ96QU6 501 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 RASSF4Q9H2L5 321 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 POTEB3A0JP26 581 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 POTECB2RU33 542 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 LMNB1P20700 586 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 QRICH1Q2TAL8 776 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 POTEBQ6S5H4 581 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 UNC13DQ70J99 1090 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 PARD6BQ9BYG5 372 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 EPB41L5Q9HCM4 733 aa15.65■□□□□ 0.1
SCARB2-208ENST00000638372 MXI1P50539 228 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 MFAP3P55082 362 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 ARHGAP4P98171 946 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 SF3B3Q15393 1217 aaKnown RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 CFAP157Q5JU67 520 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 USP49Q70CQ1 688 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 EPB41L4AQ9HCS5 686 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 UBE2TQ9NPD8 197 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 POLR1AO95602 1720 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 NDC80O14777 642 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 NT5C2P49902 561 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 HHATQ5VTY9 493 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 CEP128Q6ZU80 1094 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 CCDC170Q8IYT3 715 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 RAB20Q9NX57 234 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 PTPN22Q9Y2R2 807 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 HEXIM1O94992 359 aaKnown RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 YWHAEP62258 255 aaKnown RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 ZNF653Q96CK0 615 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 ZNF148Q9UQR1 794 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 USP27XA6NNY8 438 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 A6NNZ2 444 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 FDPSP14324 419 aaKnown RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 C2orf54Q08AI8 447 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 NAA30Q147X3 362 aaPredicted RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 TUBB8Q3ZCM7 444 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 SUPT20HL1Q3ZLR7 823 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 FAM160B2Q86V87 743 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 SESTD1Q86VW0 696 aa15.64■□□□□ 0.09
SCARB2-208ENST00000638372 METTL16Q86W50 562 aaKnown RBP15.64■□□□□ 0.09
SCARB2-208ENST00000638372 M0QZ92 97 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PHLDB2Q86SQ0 1253 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 VSIG1Q86XK7 387 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 RTKN2Q8IZC4 609 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PCDHB4Q9Y5E5 795 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PPP2R5EQ16537 467 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 TTC19Q6DKK2 380 aaPredicted RBP15.63■□□□□ 0.09
SCARB2-208ENST00000638372 CROCCP2Q86T23 111 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 RSAD2Q8WXG1 361 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PEX3P56589 373 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 ALKBH5Q6P6C2 394 aaKnown RBP15.63■□□□□ 0.09
SCARB2-208ENST00000638372 BCAS4Q8TDM0 211 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 CEP63Q96MT8 703 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 APOL6Q9BWW8 343 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PARP2Q9UGN5 583 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PCDHA13Q9Y5I0 950 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 LGALS16A8MUM7 142 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 HSPA1LP34931 641 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 DALRD3Q5D0E6 543 aaKnown RBP15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PDXDC2PQ6P474 469 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 PNMA8AQ86V59 439 aaPredicted RBP15.63■□□□□ 0.09
SCARB2-208ENST00000638372 SFR1Q86XK3 245 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 DHX40Q8IX18 779 aaKnown RBP15.63■□□□□ 0.09
SCARB2-208ENST00000638372 ADGRF4Q8IZF3 695 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 JRKLQ9Y4A0 524 aa15.63■□□□□ 0.09
SCARB2-208ENST00000638372 OSTNP61366 133 aa15.62■□□□□ 0.09
SCARB2-208ENST00000638372 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.62■□□□□ 0.09
SCARB2-208ENST00000638372 CEP170BQ9Y4F5 1589 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-208ENST00000638372 POTEFA5A3E0 1075 aa15.62■□□□□ 0.09
SCARB2-208ENST00000638372 CTDNEP1O95476 244 aa15.62■□□□□ 0.09
SCARB2-208ENST00000638372 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
SCARB2-208ENST00000638372 CLCN6P51797 869 aa15.62■□□□□ 0.09
SCARB2-208ENST00000638372 TFAMQ00059 246 aaKnown RBP15.62■□□□□ 0.09
SCARB2-208ENST00000638372 ITIH3Q06033 890 aa15.62■□□□□ 0.09
SCARB2-208ENST00000638372 AP3B2Q13367 1082 aa15.62■□□□□ 0.09
SCARB2-208ENST00000638372 PPP2R5AQ15172 486 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms