RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 VSIG10LQ86VR7 867 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 CYP2W1Q8TAV3 490 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 CDHR1Q96JP9 859 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 INPP4AQ96PE3 977 aaPredicted RBP17.23■□□□□ 0.35
CLN6-219ENST00000637329 GSDMAQ96QA5 445 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
CLN6-219ENST00000637329 TEKT3Q9BXF9 490 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 KBTBD4Q9NVX7 518 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 PCDHA5Q9Y5H7 936 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 ZNF236Q9UL36 1845 aa17.23■□□□□ 0.35
CLN6-219ENST00000637329 NR3C2P08235 984 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 CCT6AP40227 531 aaKnown RBP17.22■□□□□ 0.35
CLN6-219ENST00000637329 AMPD3Q01432 767 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 GNPTABQ3T906 1256 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 B3GNT9Q6UX72 402 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 NLRX1Q86UT6 975 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 GPRC5AQ8NFJ5 357 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 BPIFA3Q9BQP9 254 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 POLR3CQ9BUI4 534 aaPredicted RBP17.22■□□□□ 0.35
CLN6-219ENST00000637329 LRRC27Q9C0I9 530 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 KCNH7Q9NS40 1196 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 TBC1D22BQ9NU19 505 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 RMND1Q9NWS8 449 aa17.22■□□□□ 0.35
CLN6-219ENST00000637329 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 POTEB2H3BUK9 544 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 CYP2C8P10632 490 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 EDNRBP24530 442 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 RPA1P27694 616 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.35
CLN6-219ENST00000637329 SOX10P56693 466 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 INHBEP58166 350 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 MKRN3Q13064 507 aaKnown RBP17.21■□□□□ 0.35
CLN6-219ENST00000637329 KCTD2Q14681 263 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 FAM110CQ1W6H9 321 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 OTOP1Q7RTM1 612 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 GRAMD1CQ8IYS0 662 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 FAM133AQ8N9E0 248 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
CLN6-219ENST00000637329 PNMA5Q96PV4 448 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 GTPBP4Q9BZE4 634 aaKnown RBP17.21■□□□□ 0.35
CLN6-219ENST00000637329 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 AGO4Q9HCK5 861 aaKnown RBP17.21■□□□□ 0.35
CLN6-219ENST00000637329 TUFT1Q9NNX1 390 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 DACH1Q9UI36 760 aa17.21■□□□□ 0.35
CLN6-219ENST00000637329 ARP10275 920 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 MYCLP12524 364 aaPredicted RBP17.2■□□□□ 0.34
CLN6-219ENST00000637329 AFMP43652 599 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 ZNF165P49910 485 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 MORC3Q14149 939 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 CT47A1Q5JQC4 288 aaPredicted RBP17.2■□□□□ 0.34
CLN6-219ENST00000637329 CNNM4Q6P4Q7 775 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 ABRAQ8N0Z2 381 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 RAD54LQ92698 747 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 ERCC4Q92889 916 aaPredicted RBP17.2■□□□□ 0.34
CLN6-219ENST00000637329 GJA10Q969M2 543 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 MMP19Q99542 508 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 MTRQ99707 1265 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 TCEAL9Q9UHQ7 104 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 MAN1B1Q9UKM7 699 aa17.2■□□□□ 0.34
CLN6-219ENST00000637329 DNAJC25-GNG10A0A024R161 153 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 FCER1AP12319 257 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
CLN6-219ENST00000637329 SREBF2Q12772 1141 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 STXBP2Q15833 593 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 DPCR1Q3MIW9 517 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 C11orf57Q6ZUT1 292 aaPredicted RBP17.19■□□□□ 0.34
CLN6-219ENST00000637329 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 MLKLQ8NB16 471 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 RNF214Q8ND24 703 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 RDM1Q8NG50 284 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 LRRC15Q8TF66 581 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 PTPN18Q99952 460 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 BLOC1S4Q9NUP1 217 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 PLXNB2O15031 1838 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 NFASCO94856 1347 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 ADGRA2Q96PE1 1338 aa17.19■□□□□ 0.34
CLN6-219ENST00000637329 LOXHD1Q8IVV2 1947 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 ICAM3P32942 547 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 KRT76Q01546 638 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 NOGQ13253 232 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 KCNB1Q14721 858 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 EPHA7Q15375 998 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 ANP32BQ92688 251 aaKnown RBP17.18■□□□□ 0.34
CLN6-219ENST00000637329 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
CLN6-219ENST00000637329 PURBQ96QR8 312 aaKnown RBP17.18■□□□□ 0.34
CLN6-219ENST00000637329 C7orf25Q9BPX7 421 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 NUDT12Q9BQG2 462 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 EIF2AK1Q9BQI3 630 aaKnown RBP17.18■□□□□ 0.34
CLN6-219ENST00000637329 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 UNC45AQ9H3U1 944 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 CBX8Q9HC52 389 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 ASTN1O14525 1302 aa17.18■□□□□ 0.34
CLN6-219ENST00000637329 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms