RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 NOSTRINQ8IVI9 506 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 AFG1LQ8WV93 481 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 LENG9Q96B70 501 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 MLXIPQ9HAP2 919 aa19.53■□□□□ 0.72
CLN6-218ENST00000637223 AGO4Q9HCK5 861 aaKnown RBP19.53■□□□□ 0.72
CLN6-218ENST00000637223 CCNT1O60563 726 aaKnown RBP19.52■□□□□ 0.72
CLN6-218ENST00000637223 ATP2B1P20020 1258 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 PDCP20941 246 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 CST5P28325 142 aaPredicted RBP19.52■□□□□ 0.72
CLN6-218ENST00000637223 NKX3-2P78367 333 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 SETQ01105 290 aaPredicted RBP19.52■□□□□ 0.72
CLN6-218ENST00000637223 SP4Q02446 784 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 KCNA10Q16322 511 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 MYSM1Q5VVJ2 828 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 DEFB123Q8N688 67 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 PAWRQ96IZ0 340 aaKnown RBP19.52■□□□□ 0.72
CLN6-218ENST00000637223 SPATA33Q96N06 139 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 SENP7Q9BQF6 1050 aa19.52■□□□□ 0.72
CLN6-218ENST00000637223 CYP3A7-CYP3A51PA0A087WV96 503 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 WNT7AO00755 349 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 SYT1P21579 422 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 CYP3A7P24462 503 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 U2AF2P26368 475 aaKnown RBP eCLIP19.51■□□□□ 0.71
CLN6-218ENST00000637223 CPT1AP50416 773 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 ITGB3BPQ13352 177 aaPredicted RBP19.51■□□□□ 0.71
CLN6-218ENST00000637223 CCSAPQ6IQ19 270 aaPredicted RBP19.51■□□□□ 0.71
CLN6-218ENST00000637223 Q7L0L9 218 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 EMID1Q96A84 441 aaPredicted RBP19.51■□□□□ 0.71
CLN6-218ENST00000637223 FERMT2Q96AC1 680 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 ZNF577Q9BSK1 485 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 DDX25Q9UHL0 483 aaKnown RBP19.51■□□□□ 0.71
CLN6-218ENST00000637223 TELO2Q9Y4R8 837 aa19.51■□□□□ 0.71
CLN6-218ENST00000637223 A6NJR5 290 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 DDX39AO00148 427 aaKnown RBP19.5■□□□□ 0.71
CLN6-218ENST00000637223 SLC37A4O43826 429 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 ASGR1P07306 291 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 MMP3P08254 477 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 MYL3P08590 195 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 ACLYP53396 1101 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 HSDL1Q3SXM5 330 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 Q4G0T1 1027 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 BRDTQ58F21 947 aaPredicted RBP19.5■□□□□ 0.71
CLN6-218ENST00000637223 MOXD1Q6UVY6 613 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 METTL7BQ6UX53 244 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 PCSK9Q8NBP7 692 aaKnown RBP19.5■□□□□ 0.71
CLN6-218ENST00000637223 GIMAP8Q8ND71 665 aaPredicted RBP19.5■□□□□ 0.71
CLN6-218ENST00000637223 PPTC7Q8NI37 304 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 MBOAT7Q96N66 472 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 TSEN34Q9BSV6 310 aaKnown RBP19.5■□□□□ 0.71
CLN6-218ENST00000637223 C11orf49Q9H6J7 331 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 PHF24Q9UPV7 400 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 FRMPD3Q5JV73 1810 aa19.5■□□□□ 0.71
CLN6-218ENST00000637223 IPO5O00410 1097 aaKnown RBP19.49■□□□□ 0.71
CLN6-218ENST00000637223 MSH4O15457 936 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 ZEB2O60315 1214 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 GCFC2P16383 781 aaKnown RBP19.49■□□□□ 0.71
CLN6-218ENST00000637223 PPP4R3AQ6IN85 833 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 CXCL17Q6UXB2 119 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 NECAB2Q7Z6G3 386 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 GJA10Q969M2 543 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 NAP1L4Q99733 375 aaKnown RBP19.49■□□□□ 0.71
CLN6-218ENST00000637223 SDF4Q9BRK5 362 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 SENP6Q9GZR1 1112 aaPredicted RBP19.49■□□□□ 0.71
CLN6-218ENST00000637223 JPH1Q9HDC5 661 aaPredicted RBP19.49■□□□□ 0.71
CLN6-218ENST00000637223 KIAA1217Q5T5P2 1943 aa19.49■□□□□ 0.71
CLN6-218ENST00000637223 A0A1W2PQ45 241 aaPredicted RBP19.48■□□□□ 0.71
CLN6-218ENST00000637223 A0A1W2PQY0 241 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 MOXD2PA6NHM9 499 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 NOP56O00567 594 aaKnown RBP19.48■□□□□ 0.71
CLN6-218ENST00000637223 COL6A1P12109 1028 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 GPR153Q6NV75 609 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 FERMT3Q86UX7 667 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 NOL7Q9UMY1 257 aaKnown RBP19.48■□□□□ 0.71
CLN6-218ENST00000637223 STXBP5LQ9Y2K9 1186 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 NFASCO94856 1347 aa19.48■□□□□ 0.71
CLN6-218ENST00000637223 MYH7BA7E2Y1 1941 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 STX6O43752 255 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 NBR1Q14596 966 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 DGKDQ16760 1214 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 GPR20Q99678 358 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 GDF15Q99988 308 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 COL25A1Q9BXS0 654 aaPredicted RBP19.47■□□□□ 0.71
CLN6-218ENST00000637223 POLR3EQ9NVU0 708 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 SLC9A2Q9UBY0 812 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 MTMR6Q9Y217 621 aa19.47■□□□□ 0.71
CLN6-218ENST00000637223 DHX15O43143 795 aaKnown RBP19.46■□□□□ 0.71
CLN6-218ENST00000637223 ZNF286BP0CG31 522 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 MCM7P33993 719 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 BMP8BP34820 402 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 ANP32AP39687 249 aaKnown RBP19.46■□□□□ 0.71
CLN6-218ENST00000637223 ATN1P54259 1190 aaPredicted RBP19.46■□□□□ 0.71
CLN6-218ENST00000637223 PURAQ00577 322 aaKnown RBP19.46■□□□□ 0.71
CLN6-218ENST00000637223 ZNF174Q15697 407 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 TTC38Q5R3I4 469 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 ETNPPLQ8TBG4 499 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 SLC5A5Q92911 643 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 VTI1AQ96AJ9 217 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 GLT1D1Q96MS3 346 aa19.46■□□□□ 0.71
CLN6-218ENST00000637223 STARD7Q9NQZ5 370 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms