RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	ARHGEF1	Q92888	912 aa	Known RBP	5.88	□□□□□ -1.47
RYR3-223	ENST00000636845	ZNF594	Q96JF6	807 aa	Predicted RBP	5.88	□□□□□ -1.47
RYR3-223	ENST00000636845	GORASP1	Q9BQQ3	440 aa		5.88	□□□□□ -1.47
RYR3-223	ENST00000636845	PPP1R12C	Q9BZL4	782 aa		5.88	□□□□□ -1.47
RYR3-223	ENST00000636845	ZSWIM5	Q9P217	1185 aa		5.88	□□□□□ -1.47
RYR3-223	ENST00000636845	SALL4	Q9UJQ4	1053 aa		5.88	□□□□□ -1.47
RYR3-223	ENST00000636845	NFS1	Q9Y697	457 aa		5.88	□□□□□ -1.47
RYR3-223	ENST00000636845	AFF2	P51816	1311 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	LAMA4	Q16363	1823 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845		A0A1W2PQJ5	194 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	hCG_1642624	A0A1W2PR95	340 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	LRRC53	A6NM62	1247 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	POM121C	A8CG34	1229 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845		A8MUI8	341 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SART1	O43290	800 aa	Known RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	DAPK3	O43293	454 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SUN1	O94901	812 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	KRT16	P08779	473 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	ALDH3A1	P30838	453 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	EIF3B	P55884	814 aa	Known RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	COPS2	P61201	443 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	NCALD	P61601	193 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SLC39A6	Q13433	755 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	RPS6KA1	Q15418	735 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	ENOX2	Q16206	610 aa	Known RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	AMOT	Q4VCS5	1084 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PPP1R15B	Q5SWA1	713 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PDXDC2P	Q6P474	469 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PI16	Q6UXB8	463 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	MFSD6	Q6ZSS7	791 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	CCDC84	Q86UT8	332 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	EIF1AD	Q8N9N8	165 aa	Known RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	CNBD1	Q8NA66	436 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	USP38	Q8NB14	1042 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	ANKRD27	Q96NW4	1050 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	TRIM31	Q9BZY9	425 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	TRIM7	Q9C029	511 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	KRT23	Q9C075	422 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	RAB17	Q9H0T7	212 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	DPH5	Q9H2P9	285 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	ANKIB1	Q9P2G1	1089 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	RPS6KL1	Q9Y6S9	549 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PLEKHG1	Q9ULL1	1385 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	A2ML1	A8K2U0	1454 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SPDYE5	A6NIY4	337 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845		H7C1W4	665 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	RGS16	O15492	202 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PPFIA2	O75334	1257 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	RNF8	O76064	485 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	ALAD	P13716	330 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	RAD23B	P54727	409 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	KLC1	Q07866	573 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	USP4	Q13107	963 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PDIA6	Q15084	440 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SLC9C1	Q4G0N8	1177 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	FIGN	Q5HY92	759 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	TMEM154	Q6P9G4	183 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	MTHFD1L	Q6UB35	978 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	APLF	Q8IW19	511 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	STAG2	Q8N3U4	1231 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	FANCB	Q8NB91	859 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PROCA1	Q8NCQ7	364 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	NKX2-3	Q8TAU0	364 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	CENPT	Q96BT3	561 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	INPP4A	Q96PE3	977 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	ZNF317	Q96PQ6	595 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PLIN2	Q99541	437 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	MTR	Q99707	1265 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	PRMT1	Q99873	361 aa	Known RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	CDCA7	Q9BWT1	371 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	AP1M1	Q9BXS5	423 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	TANGO6	Q9C0B7	1094 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	DDX47	Q9H0S4	455 aa	Known RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SUDS3	Q9H7L9	328 aa	Predicted RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	CNNM2	Q9H8M5	875 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	ADAM22	Q9P0K1	906 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	UTP11	Q9Y3A2	253 aa	Known RBP	5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SLC4A4	Q9Y6R1	1079 aa		5.87	□□□□□ -1.47
RYR3-223	ENST00000636845	SOS2	Q07890	1332 aa	Predicted RBP	5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	CCDC169	A6NNP5	214 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	KRIT1	O00522	736 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	CREB3	O43889	395 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	PRDM1	O75626	825 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	RARA	P10276	462 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	ADORA1	P30542	326 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	UBA7	P41226	1012 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	DYNC1I2	Q13409	638 aa	Known RBP	5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	KIAA0753	Q2KHM9	967 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	TTI2	Q6NXR4	508 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	PIGW	Q7Z7B1	504 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	LONP2	Q86WA8	852 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	ZFAND2B	Q8WV99	257 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	P2RX5	Q93086	422 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	RBM41	Q96IZ5	413 aa	Known RBP	5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	ERGIC2	Q96RQ1	377 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	PIDD1	Q9HB75	910 aa		5.86	□□□□□ -1.47
RYR3-223	ENST00000636845	ARHGEF10L	Q9HCE6	1279 aa		5.86	□□□□□ -1.47

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