RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 CTAGE5O15320 804 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 DHX15O43143 795 aaKnown RBP17.56■□□□□ 0.4
CTSD-207ENST00000636571 FARP2O94887 1054 aaPredicted RBP17.56■□□□□ 0.4
CTSD-207ENST00000636571 RARBP10826 455 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 GCFC2P16383 781 aaKnown RBP17.56■□□□□ 0.4
CTSD-207ENST00000636571 SETQ01105 290 aaPredicted RBP17.56■□□□□ 0.4
CTSD-207ENST00000636571 RILPL1Q5EBL4 403 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 OR6J1Q8NGC5 347 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 KCNMB3Q9NPA1 279 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.56■□□□□ 0.4
CTSD-207ENST00000636571 CLIC4Q9Y696 253 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 NEMFO60524 1076 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 DUSP11O75319 330 aaKnown RBP17.56■□□□□ 0.4
CTSD-207ENST00000636571 TGFB3P10600 412 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 TRAPPC10P48553 1259 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 HSDL1Q3SXM5 330 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 CELF3Q5SZQ8 465 aaKnown RBP17.56■□□□□ 0.4
CTSD-207ENST00000636571 C4orf32Q8N8J7 132 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 XPNPEP3Q9NQH7 507 aa17.56■□□□□ 0.4
CTSD-207ENST00000636571 ADAMTS4O75173 837 aa17.55■□□□□ 0.4
CTSD-207ENST00000636571 DHX37Q8IY37 1157 aaKnown RBP17.55■□□□□ 0.4
CTSD-207ENST00000636571 U2AF1L4Q8WU68 220 aaKnown RBP17.55■□□□□ 0.4
CTSD-207ENST00000636571 AFG1LQ8WV93 481 aa17.55■□□□□ 0.4
CTSD-207ENST00000636571 SLC5A5Q92911 643 aa17.55■□□□□ 0.4
CTSD-207ENST00000636571 CDHR1Q96JP9 859 aa17.55■□□□□ 0.4
CTSD-207ENST00000636571 MAFGO15525 162 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 GH1P01241 217 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 C6orf222P0C671 652 aaPredicted RBP17.54■□□□□ 0.4
CTSD-207ENST00000636571 KRT85P78386 507 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 PTGDRQ13258 359 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 SF3A1Q15459 793 aaKnown RBP17.54■□□□□ 0.4
CTSD-207ENST00000636571 CALCRLQ16602 461 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 KCNV1Q6PIU1 500 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 ABHD8Q96I13 439 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 SPATA33Q96N06 139 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 ZNF396Q96N95 335 aaPredicted RBP17.54■□□□□ 0.4
CTSD-207ENST00000636571 MTMR9Q96QG7 549 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 SENP7Q9BQF6 1050 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
CTSD-207ENST00000636571 CCNE2O96020 404 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 GJB1P08034 283 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 NFKBIBQ15653 356 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 LRCH2Q5VUJ6 765 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 TNS4Q8IZW8 715 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 WDR81Q562E7 1941 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 CHMP2AO43633 222 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 PSMD10O75832 226 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 MCM4P33991 863 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 TXKP42681 527 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 GJA9P57773 515 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 NEDD9Q14511 834 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 METTL7BQ6UX53 244 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 CLEC17AQ6ZS10 378 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 NAP1L4Q99733 375 aaKnown RBP17.53■□□□□ 0.4
CTSD-207ENST00000636571 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 UPF3AQ9H1J1 476 aaKnown RBP17.53■□□□□ 0.4
CTSD-207ENST00000636571 UNC45AQ9H3U1 944 aa17.53■□□□□ 0.4
CTSD-207ENST00000636571 JPH1Q9HDC5 661 aaPredicted RBP17.53■□□□□ 0.4
CTSD-207ENST00000636571 NKRFO15226 690 aaKnown RBP eCLIP17.52■□□□□ 0.48e-7■■■□□ 18.5
CTSD-207ENST00000636571 MSCO60682 206 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 GAS7O60861 476 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 PRPF40AO75400 957 aaKnown RBP17.52■□□□□ 0.4
CTSD-207ENST00000636571 SGPL1O95470 568 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 LRRC41Q15345 812 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 IL17AQ16552 155 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 PPP1R13LQ8WUF5 828 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 CRISPLD2Q9H0B8 497 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 AP5M1Q9H0R1 490 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 SLC9A2Q9UBY0 812 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 VAV3Q9UKW4 847 aa17.52■□□□□ 0.4
CTSD-207ENST00000636571 NFASCO94856 1347 aa17.52■□□□□ 0.39
CTSD-207ENST00000636571 MARCH6O60337 910 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 MMP3P08254 477 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 OR52Z1P0C646 297 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 GJA8P48165 433 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 LAMC2Q13753 1193 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 PTPAQ15257 358 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 FSCN1Q16658 493 aaKnown RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 GNASQ5JWF2 1037 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 KLHDC9Q8NEP7 349 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 EMID1Q96A84 441 aaPredicted RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 GPR20Q99678 358 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 TEKT3Q9BXF9 490 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 CFAP45Q9UL16 551 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 OGDHLQ9ULD0 1010 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 GSTTP1A0A1W2PQM5 241 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 EML1O00423 815 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 TFRCP02786 760 aaKnown RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 EN2P19622 333 aaPredicted RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 MNX1P50219 401 aaPredicted RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 ACTR2P61160 394 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 ATP2C1P98194 919 aaPredicted RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 GRIN1Q05586 938 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 SPIRE1Q08AE8 756 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 PPTC7Q8NI37 304 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 DIS3LQ8TF46 1054 aaKnown RBP17.51■□□□□ 0.39
CTSD-207ENST00000636571 SPATA32Q96LK8 384 aa17.51■□□□□ 0.39
CTSD-207ENST00000636571 TMEM106CQ9BVX2 250 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms