RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 OTUD7BQ6GQQ9 843 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 NOSTRINQ8IVI9 506 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 CRACR2BQ8N4Y2 399 aaPredicted RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 CAPZA3Q96KX2 299 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 DCP1AQ9NPI6 582 aaPredicted RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 AATFQ9NY61 560 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD2-223ENST00000636306 SLC12A4Q9UP95 1085 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 REXO2Q9Y3B8 237 aaKnown RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 LTBP1Q14766 1721 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 DDX60LQ5H9U9 1706 aaKnown RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 GPR75-ASB3A0A0A6YYF3 556 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 KIF28PB7ZC32 967 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 USP17L21D6R901 530 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 UFL1O94874 794 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 TRIM37O94972 964 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 PRDX5P30044 214 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 SPAG1Q07617 926 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 SPRED3Q2MJR0 410 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 CCDC122Q5T0U0 273 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 AGBL2Q5U5Z8 902 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 KCTD16Q68DU8 428 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 MAATS1Q7Z4T9 603 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 APBB1IPQ7Z5R6 666 aaPredicted RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 ENAHQ8N8S7 591 aaPredicted RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 EIF1ADQ8N9N8 165 aaKnown RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 WHAMMQ8TF30 809 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 TBC1D5Q92609 795 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 CCDC43Q96MW1 224 aaKnown RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 PURBQ96QR8 312 aaKnown RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 ZKSCAN3Q9BRR0 538 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 LRRC1Q9BTT6 524 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 OSBPL1AQ9BXW6 950 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 TAF1DQ9H5J8 278 aaPredicted RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 GDF3Q9NR23 364 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 LRRC4BQ9NT99 713 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD2-223ENST00000636306 SWAP70Q9UH65 585 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 LIMA1Q9UHB6 759 aaKnown RBP11.82□□□□□ -0.52
CHD2-223ENST00000636306 ASB3Q9Y575 518 aa11.82□□□□□ -0.52
CHD2-223ENST00000636306 DIAPH2O60879 1101 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 WFS1O76024 890 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 PPP4CP60510 307 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 CDC37Q16543 378 aaPredicted RBP11.81□□□□□ -0.52
CHD2-223ENST00000636306 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 DIS3L2Q8IYB7 885 aaKnown RBP11.81□□□□□ -0.52
CHD2-223ENST00000636306 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 SMCR8Q8TEV9 937 aaPredicted RBP11.81□□□□□ -0.52
CHD2-223ENST00000636306 AGAP11Q8TF27 550 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 TEKT4Q8WW24 435 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 MAP3K14Q99558 947 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 KCNMB3Q9NPA1 279 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 PPANQ9NQ55 473 aaKnown RBP11.81□□□□□ -0.52
CHD2-223ENST00000636306 WDR35Q9P2L0 1181 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 CTNNAL1Q9UBT7 734 aa11.81□□□□□ -0.52
CHD2-223ENST00000636306 DMGDHQ9UI17 866 aaKnown RBP11.81□□□□□ -0.52
CHD2-223ENST00000636306 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 LRRC10BA6NIK2 292 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 TSPY2A6NKD2 308 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 ENC1O14682 589 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 PRPF3O43395 683 aaKnown RBP11.8□□□□□ -0.52
CHD2-223ENST00000636306 CREB3O43889 395 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 TCP1P17987 556 aaKnown RBP11.8□□□□□ -0.52
CHD2-223ENST00000636306 HERVK_113P62684 666 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 NUGGCQ68CJ6 796 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 AMIGO3Q86WK7 504 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 CREG2Q8IUH2 290 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 CCDC24Q8N4L8 307 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 CCDC197Q8NCU1 140 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 SPATA20Q8TB22 786 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 ZNF384Q8TF68 577 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 PIK3R5Q8WYR1 880 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 CENPTQ96BT3 561 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 MED15Q96RN5 788 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 TRIM4Q9C037 500 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 SLC12A6Q9UHW9 1150 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 SNX12Q9UMY4 172 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
CHD2-223ENST00000636306 FLOT1O75955 427 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 IL1R1P14778 569 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 DRD4P21917 467 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 MARCKSP29966 332 aaPredicted RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 CYLC1P35663 651 aaPredicted RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 GNAQP50148 359 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 MXRA7P84157 204 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 HSP90AA4PQ58FG1 418 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 HAUS3Q68CZ6 603 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 RUFY4Q6ZNE9 571 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 TRMT44Q8IYL2 757 aaKnown RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 ANKS4BQ8N8V4 417 aa11.79□□□□□ -0.52
CHD2-223ENST00000636306 KRI1Q8N9T8 703 aaKnown RBP11.79□□□□□ -0.52
CHD2-223ENST00000636306 TRAPPC9Q96Q05 1148 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms