RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 CEP55Q53EZ4 464 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 ZNF544Q6NX49 715 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 YAF2Q8IY57 180 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 TTC13Q8NBP0 860 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 MOSPD2Q8NHP6 518 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 FSD1LQ9BXM9 530 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 SERTAD1Q9UHV2 236 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 MOSPD1Q9UJG1 213 aa6.47□□□□□ -1.37
SCN1A-212ENST00000636194 E5RI56 91 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 KLHL30Q0D2K2 578 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 RCN2Q14257 317 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 MFN1Q8IWA4 741 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 DDX50Q9BQ39 737 aaKnown RBP6.46□□□□□ -1.37
SCN1A-212ENST00000636194 TRPC4Q9UBN4 977 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 DENND2AQ9ULE3 1009 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 KNTC1P50748 2209 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 DAB1O75553 588 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 BRAFP15056 766 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 PSMC3P17980 439 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 VCAM1P19320 739 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 AP1S1P61966 158 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 DMC1Q14565 340 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 STXBP2Q15833 593 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 LONRF2Q1L5Z9 754 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 TIGD7Q6NT04 549 aaPredicted RBP6.46□□□□□ -1.37
SCN1A-212ENST00000636194 SESTD1Q86VW0 696 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 RDH13Q8NBN7 331 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 USP26Q9BXU7 913 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 TBC1D2Q9BYX2 928 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 PIDD1Q9HB75 910 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 DDX25Q9UHL0 483 aaKnown RBP6.46□□□□□ -1.37
SCN1A-212ENST00000636194 ZNF229Q9UJW7 825 aa6.46□□□□□ -1.37
SCN1A-212ENST00000636194 FAM32AQ9Y421 112 aaKnown RBP6.46□□□□□ -1.37
SCN1A-212ENST00000636194 H0YIN7 160 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PRPF4O43172 522 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 LIG3P49916 1009 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 ABCE1P61221 599 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 KRT17Q04695 432 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PDE4DQ08499 809 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 RCN1Q15293 331 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 LETM2Q2VYF4 491 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 LRRC8EQ6NSJ5 796 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CADPS2Q86UW7 1296 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 TSR2Q969E8 191 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 STK32BQ9NY57 414 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CECR2Q9BXF3 1484 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 ARF4P18085 180 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 SMARCA1P28370 1054 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 DEFA1P59665 94 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 DEFA3P59666 94 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 YWHAGP61981 247 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 TFAP4Q01664 338 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PAK1Q13153 545 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 SPOPLQ6IQ16 392 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 IFNL2Q8IZJ0 200 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 YIPF2Q9BWQ6 316 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 H2AFY2Q9P0M6 372 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 IMPACTQ9P2X3 320 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 C5orf58C9J3I9 102 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PSMD14O00487 310 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 RPN2P04844 631 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 IL15P40933 162 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 HSPA2P54652 639 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 DHX34Q14147 1143 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 KRT73Q86Y46 540 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 MAGEB6Q8N7X4 407 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 ZNF713Q8N859 430 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 VPS50Q96JG6 964 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 ADD3Q9UEY8 706 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 KIF14Q15058 1648 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 GOLGA8KD6RF30 607 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 H7C0C1 242 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PIK3CDO00329 1044 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 KRIT1O00522 736 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 NCAM1P13591 858 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 ATP5OP48047 213 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 RUNX1T1Q06455 604 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 SKIV2LQ15477 1246 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 HSP90AA4PQ58FG1 418 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PPP4R3CPQ6ZMV5 832 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PALB2Q86YC2 1186 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 TNIP2Q8NFZ5 429 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 ULK4Q96C45 1275 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 DCPSQ96C86 337 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 PLEKHA8Q96JA3 519 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 NACC1Q96RE7 527 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 LSG1Q9H089 658 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CCDC8Q9H0W5 538 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 USE1Q9NZ43 259 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CCDC61Q9Y6R9 512 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 MOCS3O95396 460 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CLTAP09496 248 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CENPAP49450 140 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 CSE1LP55060 971 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 GUCY1A3Q02108 690 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 SEMA3FQ13275 785 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 KRR1Q13601 381 aaKnown RBP6.46□□□□□ -1.38
SCN1A-212ENST00000636194 GPR162Q16538 588 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 ALS2CLQ60I27 953 aa6.46□□□□□ -1.38
SCN1A-212ENST00000636194 DPP9Q86TI2 863 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms