RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
CLN6-211ENST00000635754 MYL3P08590 195 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 KCNA2P16389 499 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 ATN1P54259 1190 aaPredicted RBP17.6■□□□□ 0.41
CLN6-211ENST00000635754 NR5A1Q13285 461 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 DGKDQ16760 1214 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 INF2Q27J81 1249 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 PKD2L1Q9P0L9 805 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 ELP1O95163 1332 aa17.6■□□□□ 0.41
CLN6-211ENST00000635754 TNRC18O15417 2968 aaPredicted RBP17.6■□□□□ 0.41
CLN6-211ENST00000635754 BTBD18B2RXH4 712 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 ATP9AO75110 1047 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 ARP10275 920 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 PURAQ00577 322 aaKnown RBP17.59■□□□□ 0.41
CLN6-211ENST00000635754 HSDL1Q3SXM5 330 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 PRR16Q569H4 304 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 SLC39A5Q6ZMH5 540 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 NEK8Q86SG6 692 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 TNFRSF25Q93038 417 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
CLN6-211ENST00000635754 GNL2Q13823 731 aaKnown RBP17.58■□□□□ 0.41
CLN6-211ENST00000635754 LRRC26Q2I0M4 334 aa17.58■□□□□ 0.41
CLN6-211ENST00000635754 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.41
CLN6-211ENST00000635754 DPF3Q92784 378 aa17.58■□□□□ 0.41
CLN6-211ENST00000635754 NAP1L4Q99733 375 aaKnown RBP17.58■□□□□ 0.41
CLN6-211ENST00000635754 MTG1Q9BT17 334 aaPredicted RBP17.58■□□□□ 0.41
CLN6-211ENST00000635754 BCAS3Q9H6U6 928 aa17.58■□□□□ 0.41
CLN6-211ENST00000635754 AGO4Q9HCK5 861 aaKnown RBP17.58■□□□□ 0.41
CLN6-211ENST00000635754 A0A0U1RQG5 324 aaPredicted RBP17.57■□□□□ 0.4
CLN6-211ENST00000635754 IPO5O00410 1097 aaKnown RBP17.57■□□□□ 0.4
CLN6-211ENST00000635754 SP4Q02446 784 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 SNX17Q15036 470 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 LETM2Q2VYF4 491 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 C1orf53Q5VUE5 145 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 ZNF577Q9BSK1 485 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 FOXP1Q9H334 677 aaPredicted RBP17.57■□□□□ 0.4
CLN6-211ENST00000635754 JPH1Q9HDC5 661 aaPredicted RBP17.57■□□□□ 0.4
CLN6-211ENST00000635754 NFASCO94856 1347 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 SCN10AQ9Y5Y9 1956 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 DNAH12Q6ZR08 3092 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 PDE4DIPQ5VU43 2346 aa17.57■□□□□ 0.4
CLN6-211ENST00000635754 CYP3A7-CYP3A51PA0A087WV96 503 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 EDIL3O43854 480 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 EVI5O60447 810 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 PPFIA4O75335 1185 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 TDP2O95551 362 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 HOXD8P13378 290 aaPredicted RBP17.56■□□□□ 0.4
CLN6-211ENST00000635754 GCFC2P16383 781 aaKnown RBP17.56■□□□□ 0.4
CLN6-211ENST00000635754 CYP3A7P24462 503 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 RTP1P59025 263 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 EARS2Q5JPH6 523 aaKnown RBP17.56■□□□□ 0.4
CLN6-211ENST00000635754 LENG9Q96B70 501 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 INTS4Q96HW7 963 aaKnown RBP17.56■□□□□ 0.4
CLN6-211ENST00000635754 SLC9A2Q9UBY0 812 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 MROH7Q68CQ1 1323 aa17.56■□□□□ 0.4
CLN6-211ENST00000635754 FAM205CA6NFA0 338 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 H3BQV1 296 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 ZNF286BP0CG31 522 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 ITGB3BPQ13352 177 aaPredicted RBP17.55■□□□□ 0.4
CLN6-211ENST00000635754 ITGA7Q13683 1181 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 Q4G0T1 1027 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 GPR20Q99678 358 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 KATNAL1Q9BW62 490 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 SEZ6LQ9BYH1 1024 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 TBC1D22BQ9NU19 505 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 DDX25Q9UHL0 483 aaKnown RBP17.55■□□□□ 0.4
CLN6-211ENST00000635754 TCEAL9Q9UHQ7 104 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 ATP11BQ9Y2G3 1177 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 CCNT1O60563 726 aaKnown RBP17.55■□□□□ 0.4
CLN6-211ENST00000635754 PSMC6P62333 389 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 LARP1BQ659C4 914 aaKnown RBP17.55■□□□□ 0.4
CLN6-211ENST00000635754 PPP4R3AQ6IN85 833 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 C7orf61Q8IZ16 206 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 MBOAT7Q96N66 472 aa17.55■□□□□ 0.4
CLN6-211ENST00000635754 DDX39AO00148 427 aaKnown RBP17.54■□□□□ 0.4
CLN6-211ENST00000635754 ARVCFO00192 962 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 MSH4O15457 936 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 F2P00734 622 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 TCF7P36402 384 aaPredicted RBP17.54■□□□□ 0.4
CLN6-211ENST00000635754 CHMP4BP1P59074 171 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 NOSTRINQ8IVI9 506 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 SEPT1Q8WYJ6 367 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 UIMC1Q96RL1 719 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
CLN6-211ENST00000635754 DHX15O43143 795 aaKnown RBP17.53■□□□□ 0.4
CLN6-211ENST00000635754 PQBP1O60828 265 aaKnown RBP17.53■□□□□ 0.4
CLN6-211ENST00000635754 LGALS2P05162 132 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
CLN6-211ENST00000635754 PDCP20941 246 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 NBPF20Q3BBV1 942 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 MCTP1Q6DN14 999 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 SLC43A3Q8NBI5 491 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 KAT2BQ92831 832 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 RIT2Q99578 217 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 C16orf70Q9BSU1 422 aa17.53■□□□□ 0.4
CLN6-211ENST00000635754 DCDC2CA8MYV0 355 aa17.52■□□□□ 0.4
CLN6-211ENST00000635754 KIF28PB7ZC32 967 aa17.52■□□□□ 0.4
CLN6-211ENST00000635754 SLC37A4O43826 429 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms