RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TRIM71Q2Q1W2 868 aaKnown RBP17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 RASEFQ8IZ41 740 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 DBF4BQ8NFT6 615 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 GPKOWQ92917 476 aaPredicted RBP eCLIP17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 LMCD1Q9NZU5 365 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 GTF3C3Q9Y5Q9 886 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 BAZ2BQ9UIF8 2168 aaKnown RBP17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 PALM3A6NDB9 673 aaPredicted RBP17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 RSPH10B2B2RC85 870 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 GCOM1H8Y6P7 765 aaPredicted RBP17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 HMGB1P09429 215 aaKnown RBP17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 RSPH10BP0C881 870 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 POLR2MP0CAP2 368 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 TGFB3P10600 412 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 ERVK-21P61565 698 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 TRAF7Q6Q0C0 670 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 PIBF1Q8WXW3 757 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 ATP6V0A1Q93050 837 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 FAM122AQ96E09 287 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 MTMR8Q96EF0 704 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 PIGSQ96S52 555 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 C16orf70Q9BSU1 422 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 BCAS3Q9H6U6 928 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 INSL6Q9Y581 213 aa17.94■□□□□ 0.46
SNRNP48-203ENST00000634363 SIP14410 1827 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 C17orf102A2RUQ5 167 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 H3BRB1 525 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 AMHP03971 560 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 UBA1P22314 1058 aaKnown RBP17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 KCNB2Q92953 911 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 JAKMIP1Q96N16 626 aaKnown RBP17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 C17orf80Q9BSJ5 609 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 TUT1Q9H6E5 874 aaKnown RBP17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 EMSYQ7Z589 1322 aa17.93■□□□□ 0.46
SNRNP48-203ENST00000634363 CCDC69A6NI79 296 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 NOP56O00567 594 aaKnown RBP17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 UPP2O95045 317 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 TRAF1Q13077 416 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 DHX32Q7L7V1 743 aaKnown RBP17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 SERINC5Q86VE9 423 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 TMTC2Q8N394 836 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 SAMD3Q8N6K7 520 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 FBXO22Q8NEZ5 403 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 LRFN3Q9BTN0 628 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 RNPEPQ9H4A4 650 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 LY9Q9HBG7 655 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 RTEL1Q9NZ71 1219 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 DOCK5Q9H7D0 1870 aa17.92■□□□□ 0.46
SNRNP48-203ENST00000634363 XIRP2A4UGR9 3374 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 TREHO43280 583 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 SMIM10L2AP0DMW4 78 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 SMIM10L2BP0DMW5 78 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 PSMA5P28066 241 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 PLA2G5P39877 138 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 FGD1P98174 961 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 GHRHRQ02643 423 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 BLOC1S2Q6QNY1 142 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 LRRC2Q9BYS8 371 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 RIOX1Q9H6W3 641 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 UBE2ZQ9H832 354 aaPredicted RBP17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 SENP2Q9HC62 589 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 TRANK1O15050 2925 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 MICAL3Q7RTP6 2002 aa17.91■□□□□ 0.46
SNRNP48-203ENST00000634363 PNMA6FA0A0J9YX94 578 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 DDAH1O94760 285 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 LGALS2P05162 132 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 CTSHP09668 335 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 KCNA5P22460 613 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 LIFRP42702 1097 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 GRM4Q14833 912 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 SLC35G1Q2M3R5 365 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 PLEKHG4Q58EX7 1191 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 CYFIP1Q7L576 1253 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 ZNF654Q8IZM8 581 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 KHSRPQ92945 711 aaKnown RBP eCLIP17.9■□□□□ 0.461e-10■■■■□ 21.7
SNRNP48-203ENST00000634363 SETD4Q9NVD3 440 aa17.9■□□□□ 0.46
SNRNP48-203ENST00000634363 CYTH3O43739 400 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 SP4Q02446 784 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 COL9A3Q14050 684 aaPredicted RBP17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 GNPTABQ3T906 1256 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 TMEM31Q5JXX7 168 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 CTCFLQ8NI51 663 aaPredicted RBP17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 SEPT8Q92599 483 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 TCEANC2Q96MN5 208 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 YME1L1Q96TA2 773 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 OSBPL7Q9BZF2 842 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 CD320Q9NPF0 282 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 SLC12A7Q9Y666 1083 aa17.89■□□□□ 0.45
SNRNP48-203ENST00000634363 BDP1A6H8Y1 2624 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms