RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 FTOQ9C0B1 505 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 STK17AQ9UEE5 414 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 SSH2Q76I76 1423 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 DNAJC24Q6P3W2 148 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 PNMA3Q9UL41 463 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 WDR64B1ANS9 1081 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 HMGB1P1B2RPK0 211 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 CIAO1O76071 339 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 TTC19Q6DKK2 380 aaPredicted RBP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 PPP4R4Q6NUP7 873 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 ZNF341Q9BYN7 854 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 PHEXP78562 749 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 CAPS2Q9BXY5 557 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 MOSPD1Q9UJG1 213 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 KRT1P04264 644 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 BASP1P80723 227 aaKnown RBP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
SHPRH-211ENST00000629427 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 SPZ1Q9BXG8 430 aa12.72□□□□□ -0.37
SHPRH-211ENST00000629427 GFPT2O94808 682 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 DEPDC1BQ8WUY9 529 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 PPWD1Q96BP3 646 aaKnown RBP12.71□□□□□ -0.37
SHPRH-211ENST00000629427 PIGSQ96S52 555 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 MRPL47Q9HD33 250 aaKnown RBP12.71□□□□□ -0.37
SHPRH-211ENST00000629427 PRPSAP2O60256 369 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 HIP1RO75146 1068 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 HSPH1Q92598 858 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 SUDS3Q9H7L9 328 aaPredicted RBP12.71□□□□□ -0.37
SHPRH-211ENST00000629427 PARVGQ9HBI0 331 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 TLK1Q9UKI8 766 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 CLTAP09496 248 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 CIITAP33076 1130 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 UBE2SQ16763 222 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 MTRQ99707 1265 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 CAPN7Q9Y6W3 813 aa12.71□□□□□ -0.37
SHPRH-211ENST00000629427 HOXA13P31271 388 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-211ENST00000629427 IL9RQ01113 521 aa12.71□□□□□ -0.38
SHPRH-211ENST00000629427 CDO1Q16878 200 aa12.71□□□□□ -0.38
SHPRH-211ENST00000629427 TCOF1Q13428 1488 aaKnown RBP12.71□□□□□ -0.38
SHPRH-211ENST00000629427 PER1O15534 1290 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-211ENST00000629427 MSH2P43246 934 aa12.71□□□□□ -0.38
SHPRH-211ENST00000629427 OR6B2Q6IFH4 312 aa12.71□□□□□ -0.38
SHPRH-211ENST00000629427 ARMCX2Q7L311 632 aa12.71□□□□□ -0.38
SHPRH-211ENST00000629427 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-211ENST00000629427 DHX36Q9H2U1 1008 aaKnown RBP12.71□□□□□ -0.38
SHPRH-211ENST00000629427 PPP1R12AO14974 1030 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-211ENST00000629427 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
SHPRH-211ENST00000629427 CYP4F22Q6NT55 531 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 TMTC3Q6ZXV5 915 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 FAM49AQ9H0Q0 323 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-211ENST00000629427 HAUS4Q9H6D7 363 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 BRD1O95696 1058 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 CXCR5P32302 372 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 ADD2P35612 726 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 ADCY1Q08828 1119 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 NFX1Q12986 1120 aaKnown RBP12.7□□□□□ -0.38
SHPRH-211ENST00000629427 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 K7ERI5 159 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 ENC1O14682 589 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 DHTKD1Q96HY7 919 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-211ENST00000629427 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 ABCC12Q96J65 1359 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.7□□□□□ -0.38
SHPRH-211ENST00000629427 PPP6R2O75170 966 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 RNF219Q5W0B1 726 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-211ENST00000629427 EVI5O60447 810 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 CASP14P31944 242 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 IFNAR2P48551 515 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 CIAPIN1Q6FI81 312 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 ELMOD1Q8N336 334 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 P2RX5Q93086 422 aa12.7□□□□□ -0.38
SHPRH-211ENST00000629427 F8W8V4 182 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 ABCC4O15439 1325 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 TMED2Q15363 201 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 ZMYM1Q5SVZ6 1142 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 KCTD16Q68DU8 428 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 THEM5Q8N1Q8 247 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 TTC25Q96NG3 672 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 INTS9Q9NV88 658 aaKnown RBP12.69□□□□□ -0.38
SHPRH-211ENST00000629427 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
SHPRH-211ENST00000629427 ZNF658Q5TYW1 1059 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-211ENST00000629427 MMTAG2Q9BU76 263 aaKnown RBP12.69□□□□□ -0.38
SHPRH-211ENST00000629427 SLC13A4Q9UKG4 626 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 TBK1Q9UHD2 729 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 ERBB4Q15303 1308 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 NPR1P16066 1061 aa12.69□□□□□ -0.38
SHPRH-211ENST00000629427 EIF2AK2P19525 551 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms