RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 CLEC16AQ2KHT3 1053 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 MAP9Q49MG5 647 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 ARHGAP29Q52LW3 1261 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 HSP90AB2PQ58FF8 381 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC158Q5M9N0 1113 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC30Q5VVM6 783 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 INTS3Q68E01 1043 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SLC6A19Q695T7 634 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 RINLQ6ZS11 566 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TSHZ1Q6ZSZ6 1077 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SEPT14Q6ZU15 432 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 B4GALNT4Q76KP1 1039 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TADA2BQ86TJ2 420 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SLCO6A1Q86UG4 719 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 APLFQ8IW19 511 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 RNF168Q8IYW5 571 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 GBP7Q8N8V2 638 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SPC24Q8NBT2 197 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 NEK11Q8NG66 645 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CTCFLQ8NI51 663 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CYB5D2Q8WUJ1 264 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 NUP133Q8WUM0 1156 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 DYDC1Q8WWB3 177 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 N4BP2L2Q92802 583 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 GTF3C6Q969F1 213 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 DTNBP1Q96EV8 351 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TCTN2Q96GX1 697 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SGSM3Q96HU1 749 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CABS1Q96KC9 395 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 KREMEN1Q96MU8 473 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 EIF3CQ99613 913 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TUBB2BQ9BVA1 445 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CARD11Q9BXL7 1154 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TEX13AQ9BXU3 409 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TRIM5Q9C035 493 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 UBA5Q9GZZ9 404 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 IQCGQ9H095 443 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 NAT10Q9H0A0 1025 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 KLC2Q9H0B6 622 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 IKZF4Q9H2S9 585 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TTC12Q9H892 705 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 RXFP1Q9HBX9 757 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CD248Q9HCU0 757 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 BATF3Q9NR55 127 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 HOMER3Q9NSC5 361 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 LMBRD1Q9NUN5 540 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 IRAK4Q9NWZ3 460 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 NLRP2Q9NX02 1062 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 POLKQ9UBT6 870 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TCFL5Q9UL49 500 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 DDX19BQ9UMR2 479 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CYP8B1Q9UNU6 501 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SAMM50Q9Y512 469 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 NUB1Q9Y5A7 615 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TAF6LQ9Y6J9 622 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CAMSAP2Q08AD1 1489 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 LRRC9Q6ZRR7 1453 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 ARAP1Q96P48 1450 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CECR2Q9BXF3 1484 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 RAPGEF2Q9Y4G8 1499 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 USP19O94966 1318 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 PTPRCP08575 1304 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TIAM1Q13009 1591 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 BLMP54132 1417 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ARHGAP31Q2M1Z3 1444 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SCAF11Q99590 1463 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 FYCO1Q9BQS8 1478 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 POLR1AO95602 1720 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 GOLGA6L10A0A0M3HER8 536 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 BECN2A8MW95 431 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 EFCAB8A8MWE9 144 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 KIF3BO15066 747 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SRGAP3O43295 1099 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ZSCAN12O43309 604 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 EPB41L2O43491 1005 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 KINO60870 393 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 PPFIA2O75334 1257 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 PPFIA4O75335 1185 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 RPS6KA5O75582 802 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SNUPNO95149 360 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ZRANB2O95218 330 aaKnown RBP eCLIP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 CPP00450 1065 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 SYPP08247 313 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 CT47B1P0C2W7 299 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 NBPF7P0C2Y1 421 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 PNMA6AP0CW24 399 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 MX1P20591 662 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 LMO1P25800 156 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 OAS2P29728 719 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 ABCD1P33897 745 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 DDIT3P35638 169 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 PEX19P40855 299 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 MAPKAPK2P49137 400 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 PSMD7P51665 324 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 UBE2HP62256 183 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 CYP4F8P98187 520 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 AKAP17AQ02040 695 aaKnown RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 IFFO1Q0D2I5 559 aa2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 NMIQ13287 307 aaPredicted RBP2.35□□□□□ -2.03
SPTAN1-216ENST00000629047 NAA25Q14CX7 972 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms