RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 UTYO14607 1347 aa19.24■□□□□ 0.67
FARP1-242ENST00000627049 HSPA1LP34931 641 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 KSR1Q8IVT5 923 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 DDX17Q92841 729 aaKnown RBP19.23■□□□□ 0.67
FARP1-242ENST00000627049 SNX24Q9Y343 169 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 ZC3H13Q5T200 1668 aaKnown RBP19.23■□□□□ 0.67
FARP1-242ENST00000627049 GSG1L2A8MUP6 293 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 MAN1A1P33908 653 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 STRN3Q13033 797 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 MAP7Q14244 749 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 CAPN12Q6ZSI9 719 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 PROM2Q8N271 834 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 ZIM3Q96PE6 472 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 GCNT4Q9P109 453 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 CPS1P31327 1500 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 PVALEFA0A1B0GWK0 134 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 FAM205CA6NFA0 338 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 MYO1FO00160 1098 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 ERVK-24P63145 666 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 RILPQ96NA2 401 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 FBXL5Q9UKA1 691 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 PACSIN2Q9UNF0 486 aaPredicted RBP19.23■□□□□ 0.67
FARP1-242ENST00000627049 UFL1O94874 794 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 BAG2O95816 211 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 DCUN1D2Q6PH85 259 aa19.23■□□□□ 0.67
FARP1-242ENST00000627049 PABPC4Q13310 644 aaKnown RBP eCLIP19.22■□□□□ 0.67
FARP1-242ENST00000627049 SDCCAG8Q86SQ7 713 aaPredicted RBP19.22■□□□□ 0.67
FARP1-242ENST00000627049 CFAP61Q8NHU2 1237 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 GDAP1Q8TB36 358 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 EDEM3Q9BZQ6 932 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 SH2D4AQ9H788 454 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 CFAP73A6NFT4 308 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 PP2D1A8MPX8 630 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 USH1GQ495M9 461 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 VIRMAQ69YN4 1812 aaKnown RBP19.22■□□□□ 0.67
FARP1-242ENST00000627049 CAMSAP1Q5T5Y3 1602 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 POC1B-GALNT4F8VUJ3 575 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 PHBP35232 272 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 FAM186BQ8IYM0 893 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 CDHR2Q9BYE9 1310 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 PPP1R3GB7ZBB8 358 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 PSMC2P35998 433 aaKnown RBP19.22■□□□□ 0.67
FARP1-242ENST00000627049 RNASELQ05823 741 aaKnown RBP19.22■□□□□ 0.67
FARP1-242ENST00000627049 ANKRD40Q6AI12 368 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 OTUD6AQ7L8S5 288 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 BRIP1Q9BX63 1249 aa19.22■□□□□ 0.67
FARP1-242ENST00000627049 SCYL3Q8IZE3 742 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 PAF1Q8N7H5 531 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.21■□□□□ 0.675e-7■■■□□ 15.8
FARP1-242ENST00000627049 HAUS2Q9NVX0 235 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 LCMT1Q9UIC8 334 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 SCOCQ9UIL1 159 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 RFX5P48382 616 aaPredicted RBP19.21■□□□□ 0.67
FARP1-242ENST00000627049 SEC24CP53992 1094 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
FARP1-242ENST00000627049 PPM1KQ8N3J5 372 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 RAB3IL1Q8TBN0 382 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 MS4A14Q96JA4 679 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 ASAP1Q9ULH1 1129 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 DIS3Q9Y2L1 958 aaKnown RBP19.21■□□□□ 0.67
FARP1-242ENST00000627049 PODXLO00592 558 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 SGO2Q562F6 1265 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 APBB1IPQ7Z5R6 666 aaPredicted RBP19.21■□□□□ 0.67
FARP1-242ENST00000627049 DGKHQ86XP1 1220 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 PALM2Q8IXS6 379 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 RBM12Q9NTZ6 932 aaKnown RBP19.21■□□□□ 0.67
FARP1-242ENST00000627049 TBK1Q9UHD2 729 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 OVOS2A0A0J9YW53 1432 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 OVOS2Q6IE36 1432 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 OPHN1O60890 802 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 SKIP12755 728 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 WDR78Q5VTH9 848 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 NBPF10Q6P3W6 841 aaKnown RBP19.21■□□□□ 0.67
FARP1-242ENST00000627049 BTG4Q9NY30 223 aa19.21■□□□□ 0.67
FARP1-242ENST00000627049 GCFC2P16383 781 aaKnown RBP19.2■□□□□ 0.66
FARP1-242ENST00000627049 CYP4A11Q02928 519 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 TXNRD1Q16881 649 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 STAG2Q8N3U4 1231 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 CCDC89Q8N998 374 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 SPDL1Q96EA4 605 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 FAM212AQ96EL1 285 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 PIGSQ96S52 555 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 FAM107AO95990 144 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 PDXDC1Q6P996 788 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 FBXO41Q8TF61 875 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 TSC22D3Q99576 134 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 KIF3CO14782 793 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 MYL7Q01449 175 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 GUF1Q8N442 669 aaKnown RBP19.2■□□□□ 0.66
FARP1-242ENST00000627049 MAP2K7O14733 419 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 RIMBP2O15034 1052 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 ARMC2Q8NEN0 867 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 MAP3K14Q99558 947 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 AGXT2Q9BYV1 514 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 SLITRK6Q9H5Y7 841 aa19.2■□□□□ 0.66
FARP1-242ENST00000627049 RTCBQ9Y3I0 505 aaKnown RBP19.2■□□□□ 0.66
FARP1-242ENST00000627049 PMS2P54278 862 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms