RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 TUBA3CQ13748 450 aa4.3□□□□□ -1.72
CHD2-203ENST00000625243 STEAP3Q658P3 488 aa4.3□□□□□ -1.72
CHD2-203ENST00000625243 TUBA3EQ6PEY2 450 aa4.3□□□□□ -1.72
CHD2-203ENST00000625243 ZNF483Q8TF39 744 aaPredicted RBP4.3□□□□□ -1.72
CHD2-203ENST00000625243 TMEM169Q96HH4 297 aa4.3□□□□□ -1.72
CHD2-203ENST00000625243 AJUBAQ96IF1 538 aa4.3□□□□□ -1.72
CHD2-203ENST00000625243 PHAXQ9H814 394 aaKnown RBP4.3□□□□□ -1.72
CHD2-203ENST00000625243 MAKP20794 623 aa4.29□□□□□ -1.72
CHD2-203ENST00000625243 BCL6P41182 706 aa4.29□□□□□ -1.72
CHD2-203ENST00000625243 SMAD2Q15796 467 aaKnown RBP4.29□□□□□ -1.72
CHD2-203ENST00000625243 IQCEQ6IPM2 695 aa4.29□□□□□ -1.72
CHD2-203ENST00000625243 DNAJC14Q6Y2X3 702 aaPredicted RBP4.29□□□□□ -1.72
CHD2-203ENST00000625243 NLRP10Q86W26 655 aa4.29□□□□□ -1.72
CHD2-203ENST00000625243 Q8N1Y9 231 aa4.29□□□□□ -1.72
CHD2-203ENST00000625243 FAM89AQ96GI7 184 aa4.29□□□□□ -1.72
CHD2-203ENST00000625243 SLC12A7Q9Y666 1083 aa4.29□□□□□ -1.72
CHD2-203ENST00000625243 RAMP2O60895 175 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 TADA3O75528 432 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 FBXO21O94952 628 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 ACRV1P26436 265 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 GTF2A2P52657 109 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 RAC3P60763 192 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 ZNF568Q3ZCX4 644 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 PCSK4Q6UW60 755 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 ZNF627Q7L945 461 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 POLNQ7Z5Q5 900 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 FRS2Q8WU20 508 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 PTPN22Q9Y2R2 807 aa4.28□□□□□ -1.72
CHD2-203ENST00000625243 MYO1BO43795 1136 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 KNG1P01042 644 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 CHGBP05060 677 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 CCDC27Q2M243 656 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 VASNQ6EMK4 673 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 MAMDC4Q6UXC1 1216 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 SND1Q7KZF4 910 aaKnown RBP eCLIP4.27□□□□□ -1.73
CHD2-203ENST00000625243 DTX3Q8N9I9 347 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 CRBNQ96SW2 442 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 EMC9Q9Y3B6 208 aa4.27□□□□□ -1.73
CHD2-203ENST00000625243 CR2P20023 1033 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 BMP5P22003 454 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 USP10Q14694 798 aaKnown RBP4.26□□□□□ -1.73
CHD2-203ENST00000625243 CCDC142Q17RM4 750 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 EMC4Q5J8M3 183 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 POMZP3Q6PJE2 187 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 PROSER1Q86XN7 944 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 REXO1L1PQ8IX06 675 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 ZNF513Q8N8E2 541 aaPredicted RBP4.26□□□□□ -1.73
CHD2-203ENST00000625243 NPLOC4Q8TAT6 608 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 KLHL6Q8WZ60 621 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 DIO2Q92813 273 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 CLIP3Q96DZ5 547 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 OR14A2Q96R54 314 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 KATNBL1Q9H079 304 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 CYP26B1Q9NR63 512 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 HSPBP1Q9NZL4 362 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 MYOTQ9UBF9 498 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 APEX2Q9UBZ4 518 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 REXO2Q9Y3B8 237 aaKnown RBP4.26□□□□□ -1.73
CHD2-203ENST00000625243 SLC30A1Q9Y6M5 507 aa4.26□□□□□ -1.73
CHD2-203ENST00000625243 ANKRD34BA5PLL1 514 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 NOP56O00567 594 aaKnown RBP4.25□□□□□ -1.73
CHD2-203ENST00000625243 ZNF888P0CJ79 500 aaPredicted RBP4.25□□□□□ -1.73
CHD2-203ENST00000625243 GLRBP48167 497 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 MFAP1P55081 439 aaKnown RBP4.25□□□□□ -1.73
CHD2-203ENST00000625243 GTF2IRD2BQ6EKJ0 949 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 CCDC81Q6ZN84 652 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 GTF2IRD2Q86UP8 949 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 CCDC103Q8IW40 242 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 ZNF808Q8N4W9 903 aaPredicted RBP4.25□□□□□ -1.73
CHD2-203ENST00000625243 CRACR2BQ8N4Y2 399 aaPredicted RBP4.25□□□□□ -1.73
CHD2-203ENST00000625243 BVESQ8NE79 360 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 CHAMP1Q96JM3 812 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 PRRX2Q99811 253 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 DPYSL5Q9BPU6 564 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 TTPALQ9BTX7 342 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 ZFP69BQ9UJL9 534 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 FBXL7Q9UJT9 491 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 OAZ3Q9UMX2 235 aa4.25□□□□□ -1.73
CHD2-203ENST00000625243 A0A1W2PQH9 124 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 H7BY64 318 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 ARNTLO00327 626 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 CDC14BO60729 498 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 DGKIO75912 1065 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 CKMP06732 381 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 ERCC3P19447 782 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 DNAJA1P31689 397 aaKnown RBP4.24□□□□□ -1.73
CHD2-203ENST00000625243 E4F1Q66K89 784 aaPredicted RBP4.24□□□□□ -1.73
CHD2-203ENST00000625243 KIAA1211LQ6NV74 962 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 ULK2Q8IYT8 1036 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 STPG3Q8N7X2 389 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 PHOSPHO1Q8TCT1 267 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD2-203ENST00000625243 CARD11Q9BXL7 1154 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 SMOC1Q9H4F8 434 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 PCSK5Q92824 1860 aa4.24□□□□□ -1.73
CHD2-203ENST00000625243 H0Y858 1186 aa4.23□□□□□ -1.73
CHD2-203ENST00000625243 KRT4P19013 534 aa4.23□□□□□ -1.73
CHD2-203ENST00000625243 HIBADHP31937 336 aaKnown RBP4.23□□□□□ -1.73
CHD2-203ENST00000625243 ZC3H6P61129 1189 aaKnown RBP4.23□□□□□ -1.73
CHD2-203ENST00000625243 GRIN1Q05586 938 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms