RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 FIBPO43427 364 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 F2P00734 622 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 ACRP10323 421 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 UBA1P22314 1058 aaKnown RBP14.46□□□□□ -0.09
PNKP-217ENST00000625216 RFC2P35250 354 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 PSEN2P49810 448 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 SP2Q02086 613 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 NLRX1Q86UT6 975 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 CCDC155Q8N6L0 562 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 ZNF713Q8N859 430 aaPredicted RBP14.46□□□□□ -0.09
PNKP-217ENST00000625216 C7orf31Q8N865 590 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 SENP7Q9BQF6 1050 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 LLPHQ9BRT6 129 aaKnown RBP14.46□□□□□ -0.09
PNKP-217ENST00000625216 WNT8AQ9H1J5 351 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 SEMA6BQ9H3T3 888 aa14.46□□□□□ -0.09
PNKP-217ENST00000625216 BAZ2BQ9UIF8 2168 aaKnown RBP14.46□□□□□ -0.1
PNKP-217ENST00000625216 HAS3O00219 553 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 ADD1P35611 737 aaKnown RBP14.45□□□□□ -0.1
PNKP-217ENST00000625216 CHMP4BP1P59074 171 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 FUT2Q10981 343 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 PTGISQ16647 500 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 HSDL1Q3SXM5 330 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 PPP1R18Q6NYC8 613 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 METTL7BQ6UX53 244 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 HEATR3Q7Z4Q2 680 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 GIMAP8Q8ND71 665 aaPredicted RBP14.45□□□□□ -0.1
PNKP-217ENST00000625216 CAGE1Q8TC20 777 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 CDHR1Q96JP9 859 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 GLT8D2Q9H1C3 349 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 RTEL1Q9NZ71 1219 aa14.45□□□□□ -0.1
PNKP-217ENST00000625216 V9GY48 417 aaPredicted RBP14.45□□□□□ -0.1
PNKP-217ENST00000625216 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 SPDYE3A6NKU9 549 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 MAFGO15525 162 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 PPFIA3O75145 1194 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 PARNO95453 639 aaKnown RBP14.44□□□□□ -0.1
PNKP-217ENST00000625216 MFSD10Q14728 455 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 NTRK3Q16288 839 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 KIAA0753Q2KHM9 967 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 GDF6Q6KF10 455 aaPredicted RBP14.44□□□□□ -0.1
PNKP-217ENST00000625216 GPRASP2Q96D09 838 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 SCLYQ96I15 445 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
PNKP-217ENST00000625216 EHMT1Q9H9B1 1298 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 GTF2IRD1Q9UHL9 959 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 ZDHHC9Q9Y397 364 aa14.44□□□□□ -0.1
PNKP-217ENST00000625216 SCN10AQ9Y5Y9 1956 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 CNTNAP5Q8WYK1 1306 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
PNKP-217ENST00000625216 FOSP01100 380 aaPredicted RBP14.43□□□□□ -0.1
PNKP-217ENST00000625216 IQCF3P0C7M6 154 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 ACTN1P12814 892 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 FDPSP14324 419 aaKnown RBP14.43□□□□□ -0.1
PNKP-217ENST00000625216 RBL2Q08999 1139 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 GPKOWQ92917 476 aaPredicted RBP eCLIP14.43□□□□□ -0.1
PNKP-217ENST00000625216 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 ALG1Q9BT22 464 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 HDAC6Q9UBN7 1215 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 PCDHA6Q9UN73 950 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 PCDHA8Q9Y5H6 950 aa14.43□□□□□ -0.1
PNKP-217ENST00000625216 CPLX1O14810 134 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 BRD1O95696 1058 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 ZNF286BP0CG31 522 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 SYT1P21579 422 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 DNAJB2P25686 324 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 NAPAP54920 295 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 HMGN5P82970 282 aaKnown RBP14.42□□□□□ -0.1
PNKP-217ENST00000625216 SEMA3FQ13275 785 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 PTK7Q13308 1070 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 CYFIP1Q7L576 1253 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 OTOP2Q7RTS6 562 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 PPP1R13LQ8WUF5 828 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 FAM161BQ96MY7 647 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 GUCD1Q96NT3 240 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 TTYH1Q9H313 450 aaPredicted RBP14.42□□□□□ -0.1
PNKP-217ENST00000625216 RIC8AQ9NPQ8 531 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 BARHL2Q9NY43 387 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 SLC4A7Q9Y6M7 1214 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 TCHHQ07283 1943 aa14.42□□□□□ -0.1
PNKP-217ENST00000625216 STK36Q9NRP7 1315 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 H3BRB1 525 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 SORBS3O60504 671 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 IFNAR1P17181 557 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 NUCB2P80303 420 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 RAB30Q15771 203 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 UBE2SQ16763 222 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 MCTP2Q6DN12 878 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 PHKBQ93100 1093 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 TIFAQ96CG3 184 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 VWCEQ96DN2 955 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 CTAGE1Q96RT6 745 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
PNKP-217ENST00000625216 GPR20Q99678 358 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 TUT1Q9H6E5 874 aaKnown RBP14.41□□□□□ -0.1
PNKP-217ENST00000625216 JADE2Q9NQC1 790 aa14.41□□□□□ -0.1
PNKP-217ENST00000625216 CXXC1Q9P0U4 656 aaPredicted RBP14.41□□□□□ -0.1
PNKP-217ENST00000625216 ORC3Q9UBD5 711 aaPredicted RBP14.41□□□□□ -0.1
PNKP-217ENST00000625216 MSRAQ9UJ68 235 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms