RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 WNK4Q96J92 1243 aa5.97□□□□□ -1.45
CDKL5-207ENST00000624700 CELF4Q9BZC1 486 aaKnown RBP5.97□□□□□ -1.45
CDKL5-207ENST00000624700 IPPKQ9H8X2 491 aa5.97□□□□□ -1.45
CDKL5-207ENST00000624700 TNFRSF12AQ9NP84 129 aa5.97□□□□□ -1.45
CDKL5-207ENST00000624700 CATSPERZQ9NTU4 200 aa5.97□□□□□ -1.45
CDKL5-207ENST00000624700 NTRK1P04629 796 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 MSL3P1P0C860 447 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 GNAT1P11488 350 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 CPEP16870 476 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 SDSP20132 328 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 IBSPP21815 317 aaPredicted RBP5.96□□□□□ -1.46
CDKL5-207ENST00000624700 SOX5P35711 763 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 MAPKAPK2P49137 400 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 NEK4P51957 841 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 LACTBP83111 547 aaPredicted RBP5.96□□□□□ -1.46
CDKL5-207ENST00000624700 GPR19Q15760 415 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 C21orf62-AS1Q17RA5 79 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 CNNM4Q6P4Q7 775 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 OTOP3Q7RTS5 596 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 FGD2Q7Z6J4 655 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 SIRT2Q8IXJ6 389 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.96□□□□□ -1.46
CDKL5-207ENST00000624700 KCNC2Q96PR1 638 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 ORAI3Q9BRQ5 295 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 SMOC1Q9H4F8 434 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 CAAP1Q9H8G2 361 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 CABP5Q9NP86 173 aa5.96□□□□□ -1.46
CDKL5-207ENST00000624700 TNPO3Q9Y5L0 923 aaKnown RBP5.96□□□□□ -1.46
CDKL5-207ENST00000624700 F8W031 263 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-207ENST00000624700 FOXD2O60548 495 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-207ENST00000624700 RASGRP1O95267 797 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 DBHP09172 617 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 VIL1P09327 827 aaKnown RBP5.95□□□□□ -1.46
CDKL5-207ENST00000624700 JMJD7P0C870 316 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 SRGAP2CP0DJJ0 459 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 TACR1P25103 407 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 GALK1P51570 392 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 YBX1P67809 324 aaKnown RBP5.95□□□□□ -1.46
CDKL5-207ENST00000624700 SSPNQ14714 243 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 RAB3GAP1Q15042 981 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 EMC4Q5J8M3 183 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 ADGRF1Q5T601 910 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 STEAP3Q658P3 488 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 DDX46Q7L014 1031 aaKnown RBP5.95□□□□□ -1.46
CDKL5-207ENST00000624700 NLRP10Q86W26 655 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 MARCH10Q8NA82 808 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-207ENST00000624700 CHAC2Q8WUX2 184 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 KCNJ15Q99712 375 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 JAM3Q9BX67 310 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 BRINP2Q9C0B6 783 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 PDGFDQ9GZP0 370 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-207ENST00000624700 SAMD15Q9P1V8 674 aa5.95□□□□□ -1.46
CDKL5-207ENST00000624700 A0A087X0B3 334 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 A0A0G2JLL6 359 aaPredicted RBP5.94□□□□□ -1.46
CDKL5-207ENST00000624700 CCDC66A2RUB6 948 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 IRS4O14654 1257 aaPredicted RBP5.94□□□□□ -1.46
CDKL5-207ENST00000624700 KCNA6P17658 529 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 FPR2P25090 351 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 HABP4Q5JVS0 413 aaKnown RBP5.94□□□□□ -1.46
CDKL5-207ENST00000624700 CDCA2Q69YH5 1023 aaPredicted RBP5.94□□□□□ -1.46
CDKL5-207ENST00000624700 ZC3H14Q6PJT7 736 aaKnown RBP5.94□□□□□ -1.46
CDKL5-207ENST00000624700 FILIP1Q7Z7B0 1213 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 SIGLEC10Q96LC7 697 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 NGRNQ9NPE2 291 aaKnown RBP5.94□□□□□ -1.46
CDKL5-207ENST00000624700 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 ZNF652Q9Y2D9 606 aa5.94□□□□□ -1.46
CDKL5-207ENST00000624700 PDE8AO60658 829 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 TRIM13O60858 407 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 TADA3O75528 432 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 CKMP06732 381 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 PYGMP11217 842 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 STAT3P40763 770 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 DNM2P50570 870 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 SRSF3P84103 164 aaKnown RBP5.93□□□□□ -1.46
CDKL5-207ENST00000624700 KIR3DS1Q14943 382 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 CT47A1Q5JQC4 288 aaPredicted RBP5.93□□□□□ -1.46
CDKL5-207ENST00000624700 C2orf69Q8N8R5 385 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 IGSF22Q8N9C0 903 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 TSPAN17Q96FV3 270 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 SCYL1Q96KG9 808 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 SIRT5Q9NXA8 310 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 MBD1Q9UIS9 605 aaPredicted RBP5.93□□□□□ -1.46
CDKL5-207ENST00000624700 FBXL7Q9UJT9 491 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 DSEQ9UL01 958 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 ZKSCAN5Q9Y2L8 839 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 IRAK3Q9Y616 596 aa5.93□□□□□ -1.46
CDKL5-207ENST00000624700 ZC3H12DA2A288 527 aaKnown RBP5.92□□□□□ -1.46
CDKL5-207ENST00000624700 GSG1L2A8MUP6 293 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 EFEMP2O95967 443 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 PI3P19957 117 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 SCNN1BP51168 640 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 NFIXQ14938 502 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 SART3Q15020 963 aaKnown RBP5.92□□□□□ -1.46
CDKL5-207ENST00000624700 TMEM177Q53S58 311 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 PIK3R6Q5UE93 754 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 ARHGAP36Q6ZRI8 547 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 ZNF662Q6ZS27 426 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 MILR1Q7Z6M3 343 aa5.92□□□□□ -1.46
CDKL5-207ENST00000624700 UHMK1Q8TAS1 419 aaKnown RBP5.92□□□□□ -1.46
CDKL5-207ENST00000624700 TARS2Q9BW92 718 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms