RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
LINC00643-206ENST00000623985 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
LINC00643-206ENST00000623985 CHD7Q9P2D1 2997 aa16.98■□□□□ 0.31
LINC00643-206ENST00000623985 HDAC6Q9UBN7 1215 aa16.98■□□□□ 0.31
LINC00643-206ENST00000623985 UNC80Q8N2C7 3258 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 TRANK1O15050 2925 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 NLRC5Q86WI3 1866 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 MYO9BQ13459 2157 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.97■□□□□ 0.31
LINC00643-206ENST00000623985 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.97■□□□□ 0.31
LINC00643-206ENST00000623985 LGALS2P05162 132 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 SCG2P13521 617 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 EVCP57679 992 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 RBL2Q08999 1139 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 AP3B2Q13367 1082 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 CYFIP1Q7L576 1253 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 C16orf70Q9BSU1 422 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 TM6SF1Q9BZW5 370 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 CYP46A1Q9Y6A2 500 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 EVPLQ92817 2033 aa16.97■□□□□ 0.31
LINC00643-206ENST00000623985 COL4A4P53420 1690 aaPredicted RBP16.97■□□□□ 0.31
LINC00643-206ENST00000623985 FOSP01100 380 aaPredicted RBP16.96■□□□□ 0.31
LINC00643-206ENST00000623985 FGBP02675 491 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 KCNA2P16389 499 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 ITGB5P18084 799 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 CLK2P49760 499 aaKnown RBP16.96■□□□□ 0.31
LINC00643-206ENST00000623985 MTMR1Q13613 665 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 RETREG2Q8NC44 543 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 AFAP1L1Q8TED9 768 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.31
LINC00643-206ENST00000623985 GPR20Q99678 358 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.31
LINC00643-206ENST00000623985 ANO3Q9BYT9 981 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 BCAS3Q9H6U6 928 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 UBIAD1Q9Y5Z9 338 aa16.96■□□□□ 0.31
LINC00643-206ENST00000623985 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 SMCO2A6NFE2 343 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 H3BRB1 525 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 IQCF3P0C7M6 154 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 DNAJB2P25686 324 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
LINC00643-206ENST00000623985 TUT1Q9H6E5 874 aaKnown RBP16.95■□□□□ 0.3
LINC00643-206ENST00000623985 JADE2Q9NQC1 790 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 ZNF215Q9UL58 517 aaPredicted RBP16.95■□□□□ 0.3
LINC00643-206ENST00000623985 STXBP5LQ9Y2K9 1186 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 PRUNE2Q8WUY3 3088 aa16.95■□□□□ 0.3
LINC00643-206ENST00000623985 MAFGO15525 162 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 PRPF3O43395 683 aaKnown RBP16.94■□□□□ 0.3
LINC00643-206ENST00000623985 PARNO95453 639 aaKnown RBP16.94■□□□□ 0.3
LINC00643-206ENST00000623985 PDIA3P30101 505 aaKnown RBP16.94■□□□□ 0.3
LINC00643-206ENST00000623985 HOXC8P31273 242 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 SREBF1P36956 1147 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 PTK7Q13308 1070 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 NTRK3Q16288 839 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 OTOP2Q7RTS6 562 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
LINC00643-206ENST00000623985 VWCEQ96DN2 955 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 GUCD1Q96NT3 240 aa16.94■□□□□ 0.3
LINC00643-206ENST00000623985 CXXC1Q9P0U4 656 aaPredicted RBP16.94■□□□□ 0.3
LINC00643-206ENST00000623985 ATP9AO75110 1047 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 ACTN1P12814 892 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 IFNAR1P17181 557 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 AKAP17AQ02040 695 aaKnown RBP16.93■□□□□ 0.3
LINC00643-206ENST00000623985 SP4Q02446 784 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 PKN1Q16512 942 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 LRRC8DQ7L1W4 858 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 DEFB128Q7Z7B8 93 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 PHKBQ93100 1093 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 PGBD1Q96JS3 809 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 FAM161BQ96MY7 647 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 MXRA8Q9BRK3 442 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 UPF3BQ9BZI7 483 aaKnown RBP16.93■□□□□ 0.3
LINC00643-206ENST00000623985 ZMYND12Q9H0C1 365 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 TTYH1Q9H313 450 aaPredicted RBP16.93■□□□□ 0.3
LINC00643-206ENST00000623985 RALGAPA2Q2PPJ7 1873 aa16.93■□□□□ 0.3
LINC00643-206ENST00000623985 C17orf102A2RUQ5 167 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 SMIM10L2AP0DMW4 78 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 SMIM10L2BP0DMW5 78 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 CKBP12277 381 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 SELPP16109 830 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 TCF7P36402 384 aaPredicted RBP16.92■□□□□ 0.3
LINC00643-206ENST00000623985 MCTP2Q6DN12 878 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 TRIM50Q86XT4 487 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 CCDC148Q8NFR7 591 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 ZNF274Q96GC6 653 aaPredicted RBP16.92■□□□□ 0.3
LINC00643-206ENST00000623985 PBX4Q9BYU1 374 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 NCOA5Q9HCD5 579 aaKnown RBP16.92■□□□□ 0.3
LINC00643-206ENST00000623985 C6orf50Q9HD87 102 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 TMEM260Q9NX78 707 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 REV3LO60673 3130 aa16.92■□□□□ 0.3
LINC00643-206ENST00000623985 ZBBXA8MT70 800 aa16.91■□□□□ 0.3
LINC00643-206ENST00000623985 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
LINC00643-206ENST00000623985 GNA11P29992 359 aa16.91■□□□□ 0.3
LINC00643-206ENST00000623985 ANAPC15P60006 121 aa16.91■□□□□ 0.3
LINC00643-206ENST00000623985 CCT2P78371 535 aaKnown RBP16.91■□□□□ 0.3
LINC00643-206ENST00000623985 HIC1Q14526 733 aa16.91■□□□□ 0.3
LINC00643-206ENST00000623985 RAB30Q15771 203 aa16.91■□□□□ 0.3
LINC00643-206ENST00000623985 TRIM71Q2Q1W2 868 aaKnown RBP16.91■□□□□ 0.3
LINC00643-206ENST00000623985 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms