RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CYP2D6P10635 497 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 CYP19A1P11511 503 aaPredicted RBP15.5■□□□□ 0.07
LDB3-209ENST00000623056 EZRP15311 586 aaKnown RBP15.5■□□□□ 0.07
LDB3-209ENST00000623056 IGHMBP2P38935 993 aaKnown RBP15.5■□□□□ 0.07
LDB3-209ENST00000623056 GYG1P46976 350 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 LRRC63Q05C16 580 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 XRCC4Q13426 336 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 ARHGAP27Q6ZUM4 889 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 DZIP3Q86Y13 1208 aaKnown RBP15.5■□□□□ 0.07
LDB3-209ENST00000623056 GUF1Q8N442 669 aaKnown RBP15.5■□□□□ 0.07
LDB3-209ENST00000623056 TBC1D5Q92609 795 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 SYN2Q92777 582 aaPredicted RBP15.5■□□□□ 0.07
LDB3-209ENST00000623056 TATDN2Q93075 761 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 PACSIN1Q9BY11 444 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 NEUROG2Q9H2A3 272 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 ATP6V0A2Q9Y487 856 aa15.5■□□□□ 0.07
LDB3-209ENST00000623056 ZNF804BA4D1E1 1349 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 KCNK3O14649 394 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 OPLAHO14841 1288 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 ATP2C2O75185 946 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
LDB3-209ENST00000623056 TECP42680 631 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 E2F5Q15329 346 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 KIAA0753Q2KHM9 967 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 FAM83BQ5T0W9 1011 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 AGBL2Q5U5Z8 902 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 SUSD4Q5VX71 490 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 GALNT17Q6IS24 598 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 TAF4BQ92750 862 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 NUCKS1Q9H1E3 243 aaKnown RBP15.49■□□□□ 0.07
LDB3-209ENST00000623056 A0A0G2JS52 829 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 MYMKA6NI61 221 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 ERVV-1B6SEH8 477 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 STXBP3O00186 592 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 CCNT1O60563 726 aaKnown RBP15.49■□□□□ 0.07
LDB3-209ENST00000623056 SLC18A3Q16572 532 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 SLC35G1Q2M3R5 365 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 LETM2Q2VYF4 491 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 UNC13DQ70J99 1090 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 SV2BQ7L1I2 683 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 ARMC9Q7Z3E5 817 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 SCFD2Q8WU76 684 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 CALML4Q96GE6 196 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 FBXL5Q9UKA1 691 aa15.49■□□□□ 0.07
LDB3-209ENST00000623056 NOVA2Q9UNW9 492 aaKnown RBP15.49■□□□□ 0.07
LDB3-209ENST00000623056 A0A087X0T9 212 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 DCDC2CA8MYV0 355 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 BHMG1C9JSJ3 638 aaPredicted RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 CES2O00748 559 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 FAM228BP0C875 321 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 POLR2FP61218 127 aaKnown RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 IFFO1Q0D2I5 559 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 RPS6KA1Q15418 735 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 GKAP1Q5VSY0 366 aaPredicted RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 TMED8Q6PL24 325 aaPredicted RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 DYMQ7RTS9 669 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 PNMA1Q8ND90 353 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 UBLCP1Q8WVY7 318 aaPredicted RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 CCT6BQ92526 530 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 HVCN1Q96D96 273 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.48■□□□□ 0.07
LDB3-209ENST00000623056 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 KAT6BQ8WYB5 2073 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 PVALEFA0A1B0GWK0 134 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 CCDC189A1A4V9 331 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 PHF20L1A8MW92 1017 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 MGRN1O60291 552 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 DNAJC8O75937 253 aaPredicted RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 SLC8A1P32418 973 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 FLT3P36888 993 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 TLDC1Q6P9B6 456 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 PROCA1Q8NCQ7 364 aaPredicted RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 ANKS1AQ92625 1134 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 P3H4Q92791 437 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 LSM14BQ9BX40 385 aaKnown RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 ATP6V0A4Q9HBG4 840 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 DCP1AQ9NPI6 582 aaPredicted RBP15.48■□□□□ 0.07
LDB3-209ENST00000623056 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
LDB3-209ENST00000623056 DRD4P21917 467 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 MAGOHP61326 146 aaKnown RBP15.47■□□□□ 0.07
LDB3-209ENST00000623056 MTMR3Q13615 1198 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 GRM4Q14833 912 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 CRYMQ14894 314 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 CCDC152Q4G0S7 254 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 CPLX4Q7Z7G2 160 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 TAX1BP1Q86VP1 789 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 MAGOHBQ96A72 148 aaKnown RBP15.47■□□□□ 0.07
LDB3-209ENST00000623056 AP1M1Q9BXS5 423 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 KDM4CQ9H3R0 1056 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 ADAMTS1Q9UHI8 967 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 MAD2L2Q9UI95 211 aa15.47■□□□□ 0.07
LDB3-209ENST00000623056 WTIPA6NIX2 430 aaPredicted RBP15.46■□□□□ 0.07
LDB3-209ENST00000623056 SART1O43290 800 aaKnown RBP15.46■□□□□ 0.07
LDB3-209ENST00000623056 CYTH3O43739 400 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 CEP104O60308 925 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 KIF4AO95239 1232 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 GHRP10912 638 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 ARID5AQ03989 594 aa15.46■□□□□ 0.07
LDB3-209ENST00000623056 GRB10Q13322 594 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms