RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 STAG3L1P0CL83 205 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 BMP3P12645 472 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 HOXD8P13378 290 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 PTGS1P23219 599 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 HOXC8P31273 242 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 CNR2P34972 360 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 ZAP70P43403 619 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 PSEN2P49810 448 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 ALDH5A1P51649 535 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 ERVFC1P60507 584 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 PDE4BQ07343 736 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 G3BP1Q13283 466 aaKnown RBP eCLIP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 BAATQ14032 418 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 BMS1Q14692 1282 aaKnown RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 KIAA0753Q2KHM9 967 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 IL31Q6EBC2 164 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 LAIR1Q6GTX8 287 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 RSPO2Q6UXX9 243 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 CYP26C1Q6V0L0 522 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 C16orf86Q6ZW13 317 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 SLC44A3Q8N4M1 653 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 MRPL43Q8N983 215 aaKnown RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 MIGA1Q8NAN2 632 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 TDRD5Q8NAT2 981 aaKnown RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 GLIS3Q8NEA6 775 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 GMCL1P1Q8NEA9 526 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 RIN2Q8WYP3 895 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 MAP4K1Q92918 833 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 IWS1Q96ST2 819 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 LSM14BQ9BX40 385 aaKnown RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 TMEM121BQ9BXQ6 578 aaPredicted RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 FTHL17Q9BXU8 183 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 BCO2Q9BYV7 579 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 RHOBTB2Q9BYZ6 727 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 POMKQ9H5K3 350 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 BCAS3Q9H6U6 928 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 PARD6AQ9NPB6 346 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 SNRKQ9NRH2 765 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 SEMA4GQ9NTN9 838 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 RNF146Q9NTX7 359 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 CLIP2Q9UDT6 1046 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 GMEB2Q9UKD1 530 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 USP18Q9UMW8 372 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 WASF3Q9UPY6 502 aa2.84□□□□□ -1.95
CPNE3-211ENST00000621526 PA2G4Q9UQ80 394 aaKnown RBP2.84□□□□□ -1.95
CPNE3-211ENST00000621526 ADGRA3Q8IWK6 1321 aa2.84□□□□□ -1.96
CPNE3-211ENST00000621526 AK9Q5TCS8 1911 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 USP9XQ93008 2570 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 SPEGQ15772 3267 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 IGKV6D-41A0A0C4DH26 115 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 C17orf102A2RUQ5 167 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 FAM221BA6H8Z2 402 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TMEM232C9JQI7 657 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 NCAM2O15394 837 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TREHO43280 583 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 LILRB3O75022 631 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 EIF3JO75822 258 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 IDH1O75874 414 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 FGF18O76093 207 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 KCNK5O95279 499 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ICAM1P05362 532 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ARP10275 920 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TGFB3P10600 412 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 SRFP11831 508 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ALAS1P13196 640 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 GLULP15104 373 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 STAT2P52630 851 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ADAM17P78536 824 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 KRT17Q04695 432 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 PRKCQQ04759 706 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 CSTF1Q05048 431 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ARHGAP1Q07960 439 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 PDE4DQ08499 809 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 C19orf57Q0VDD7 668 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 GIT2Q14161 759 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 MFSD10Q14728 455 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TTF1Q15361 905 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 PPP4R3BQ5MIZ7 849 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 TTC39AQ5SRH9 613 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 RCSD1Q6JBY9 416 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 KIAA1841Q6NSI8 718 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 XRRA1Q6P2D8 792 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 KCNV1Q6PIU1 500 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 GPR149Q86SP6 731 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 RTN4RL1Q86UN2 441 aaPredicted RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 NPAS4Q8IUM7 802 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 DHX37Q8IY37 1157 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 AMOTL1Q8IY63 956 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 MRPL50Q8N5N7 158 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 LSM14AQ8ND56 463 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 PPTC7Q8NI37 304 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 MRPS27Q92552 414 aaKnown RBP2.83□□□□□ -1.96
CPNE3-211ENST00000621526 COPS5Q92905 334 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 ATP6V0A1Q93050 837 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 WNT8BQ93098 351 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 CLUAP1Q96AJ1 413 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 CLDN23Q96B33 292 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 DYNLL2Q96FJ2 89 aa2.83□□□□□ -1.96
CPNE3-211ENST00000621526 GMCL1Q96IK5 515 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms