RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 CCDC188H7C350 402 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 GOLGA8RI6L899 631 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 NVLO15381 856 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 ECEL1O95672 775 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 IFNB1P01574 187 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 TAC1P20366 129 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 C1QTNF8P60827 252 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LAMC2Q13753 1193 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 MORC3Q14149 939 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 KHDRBS2Q5VWX1 349 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LMBR1LQ6UX01 489 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 OTUD6AQ7L8S5 288 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 POMGNT1Q8WZA1 660 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 MRPL44Q9H9J2 332 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 C1orf112Q9NSG2 853 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 GID8Q9NWU2 228 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 H3BRJ5 948 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 WBP4O75554 376 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 CPP00450 1065 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 GSNP06396 782 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 SPATA1Q5VX52 437 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 C4orf50Q6ZRC1 276 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LUZP2Q86TE4 346 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 TRIM59Q8IWR1 403 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 U2AF1L4Q8WU68 220 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 FAM89AQ96GI7 184 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LMBRD1Q9NUN5 540 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 GOLGA8JA6NMD2 632 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 MEIS1O00470 390 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PPEF1O14829 653 aaPredicted RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 IKBKBO14920 756 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 RASSF9O75901 435 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 OATP04181 439 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 YWHAGP61981 247 aaKnown RBP eCLIP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 TSPY1Q01534 308 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 HERC4Q5GLZ8 1057 aaPredicted RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 BZW1Q7L1Q6 419 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PARP9Q8IXQ6 854 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PPP1R13BQ96KQ4 1090 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 TMEM191CA6NGB0 347 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PRR23D1E9PI22 279 aaPredicted RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 TMEM191BP0C7N4 346 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PRR23D2P0DMB1 279 aaPredicted RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PSMA4P25789 261 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 HIBADHP31937 336 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 STX3Q13277 289 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 CALCRLQ16602 461 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PCGF5Q86SE9 256 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PARVBQ9HBI1 364 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PDE6AP16499 860 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 CDH2P19022 906 aaPredicted RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 PSMA3P25788 255 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 NFKBIAP25963 317 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 SLC44A4Q53GD3 710 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 MYOCDQ8IZQ8 938 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 CPXCR1Q8N123 301 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 ASPSCR1Q9BZE9 553 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LRWD1Q9UFC0 647 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 TTLL3Q9Y4R7 772 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 ARIH1Q9Y4X5 557 aaPredicted RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LOC102724428A0A0B4J2F2 783 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 GOLGA8IPA6NC78 632 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LAD1O00515 517 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 TNNC2P02585 160 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 SIK1P57059 783 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 GTF2IP78347 998 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 LETM2Q2VYF4 491 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 RAPH1Q70E73 1250 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 BICC1Q9H694 974 aaKnown RBP7.72□□□□□ -1.17
COLCA1-205ENST00000620864 MBD2Q9UBB5 411 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 MSRAQ9UJ68 235 aa7.72□□□□□ -1.17
COLCA1-205ENST00000620864 SERPINB1P30740 379 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ANGPT1Q15389 498 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ZC3H12BQ5HYM0 836 aaKnown RBP7.71□□□□□ -1.17
COLCA1-205ENST00000620864 KSR2Q6VAB6 950 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 FMO2Q99518 471 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 PKD2L2Q9NZM6 624 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF148Q9UQR1 794 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF233A6NK53 670 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 MMP10P09238 476 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 GUCY1A3Q02108 690 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF174Q15697 407 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ADRM1Q16186 407 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 CNGA2Q16280 664 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 OTUB1Q96FW1 271 aaPredicted RBP7.71□□□□□ -1.17
COLCA1-205ENST00000620864 YIPF3Q9GZM5 350 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ARMCX3Q9UH62 379 aaPredicted RBP7.71□□□□□ -1.17
COLCA1-205ENST00000620864 APOBEC2Q9Y235 224 aaKnown RBP7.71□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF711Q9Y462 761 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 KIF24Q5T7B8 1368 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 MAST3O60307 1309 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 MAP3K19Q56UN5 1328 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 GCNT3O95395 438 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 PSMC1P62191 440 aaKnown RBP7.71□□□□□ -1.17
COLCA1-205ENST00000620864 TNFAIP1Q13829 316 aa7.71□□□□□ -1.17
COLCA1-205ENST00000620864 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.71□□□□□ -1.17
COLCA1-205ENST00000620864 UTP6Q9NYH9 597 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms