RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 RNF26Q9BY78 433 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-214ENST00000619119 ADD3Q9UEY8 706 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-214ENST00000619119 GPR75-ASB3A0A0A6YYF3 556 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 A0A1B0GVG6 124 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 PKN1Q16512 942 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 MASTLQ96GX5 879 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 PDGFDQ9GZP0 370 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 FLT1P17948 1338 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 EMBQ6PCB8 327 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 MAATS1Q7Z4T9 603 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 SPATA21Q7Z572 469 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 MFN1Q8IWA4 741 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 FLAD1Q8NFF5 587 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 CCDC51Q96ER9 411 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 BIN2Q9UBW5 565 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 DAGLAQ9Y4D2 1042 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 NID2Q14112 1375 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 GMNCA6NCL1 334 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 PBX1P40424 430 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 CTCFP49711 727 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 GUCY2FP51841 1108 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 FUT2Q10981 343 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 TBC1D1Q86TI0 1168 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 AGAP11Q8TF27 550 aa17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 NOP53Q9NZM5 478 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-214ENST00000619119 TOB1P50616 345 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 RHBDL3P58872 404 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 TMTC3Q6ZXV5 915 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 CCDC63Q8NA47 563 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 MAP3K14Q99558 947 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 COA1Q9GZY4 146 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 HAUS4Q9H6D7 363 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 RGS17Q9UGC6 210 aaPredicted RBP17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 ANKRD31Q8N7Z5 1873 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 MACROD2A1Z1Q3 448 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 PPFIA2O75334 1257 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 DDAH1O94760 285 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 PTPAQ15257 358 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 EHD2Q9NZN4 543 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 SERTAD1Q9UHV2 236 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 PCDHB6Q9Y5E3 794 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 ECM29Q5VYK3 1845 aa17.39■□□□□ 0.37
SEMA3B-214ENST00000619119 FAM163BP0C2L3 166 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 CALM1P0DP23 149 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 CALM2P0DP24 149 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 CALM3P0DP25 149 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 TMOD1P28289 359 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 RCAN1P53805 252 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 EARS2Q5JPH6 523 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 ATP6V1G3Q96LB4 118 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 OSBPL1AQ9BXW6 950 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 VPS16Q9H269 839 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 ESYT3A0FGR9 886 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 GOLGA8HP0CJ92 632 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 GRIN1Q05586 938 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 CPVLQ9H3G5 476 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 RGL1Q9NZL6 768 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 SYNRGQ9UMZ2 1314 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 MAST2Q6P0Q8 1798 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 N4BP3O15049 544 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 DNAJC8O75937 253 aaPredicted RBP17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 FAM153BP0C7A2 387 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 ATP4AP20648 1035 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 CDK8P49336 464 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 FAM153CQ494X1 144 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 IFT81Q8WYA0 676 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 ZFATQ9P243 1243 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 FAM153AQ9UHL3 310 aa17.38■□□□□ 0.37
SEMA3B-214ENST00000619119 H0YIN7 160 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 SLURP2P0DP57 97 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 FERP16591 822 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 XBP1P17861 261 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 RASA1P20936 1047 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 HERVK_113P62684 666 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 ROR2Q01974 943 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 BLMHQ13867 455 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 MORC3Q14149 939 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 SMYD4Q8IYR2 804 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 ALS2CR12Q96Q35 445 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 TMEM165Q9HC07 324 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 PRPF3O43395 683 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 EYA3Q99504 573 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 PIDD1Q9HB75 910 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 PANK4Q9NVE7 773 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 STIM2Q9P246 746 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 NFU1Q9UMS0 254 aa17.37■□□□□ 0.37
SEMA3B-214ENST00000619119 ABL2P42684 1182 aa17.36■□□□□ 0.37
SEMA3B-214ENST00000619119 ITGB3BPQ13352 177 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-214ENST00000619119 BYSLQ13895 437 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-214ENST00000619119 PPP2R5BQ15173 497 aa17.36■□□□□ 0.37
SEMA3B-214ENST00000619119 KIAA0825Q8IV33 1275 aa17.36■□□□□ 0.37
SEMA3B-214ENST00000619119 SLF2Q8IX21 1173 aa17.36■□□□□ 0.37
SEMA3B-214ENST00000619119 GPKOWQ92917 476 aaPredicted RBP eCLIP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms