RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MICALL2Q8IY33 904 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 GPKOWQ92917 476 aaPredicted RBP eCLIP7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 SECISBP2LQ93073 1101 aaKnown RBP7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 TMEM39BQ9GZU3 492 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 CCDC194A0A1B0GVG4 234 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 WNT10BO00744 389 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 AKR1B10O60218 316 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 INPP5BP32019 993 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 ICA1Q05084 483 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 GRM4Q14833 912 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 DPY19L2Q6NUT2 758 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 SH3BP5LQ7L8J4 393 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 MSL3Q8N5Y2 521 aaKnown RBP7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 BCAS4Q8TDM0 211 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 OXER1Q8TDS5 423 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 ANKS1AQ92625 1134 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 CAPS2Q9BXY5 557 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 A6NNZ2 444 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 GH2P01242 217 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 CDR1P51861 262 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 TBC1D8BQ0IIM8 1120 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 PTGDRQ13258 359 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 TUBB8Q3ZCM7 444 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 TCP11X2Q5H9J9 407 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 WDR93Q6P2C0 686 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 PIK3AP1Q6ZUJ8 805 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 CCDC91Q7Z6B0 441 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 TADA2BQ86TJ2 420 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 FAM151AQ8WW52 585 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 NUP58Q9BVL2 599 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 EHD4Q9H223 541 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 RNF39Q9H2S5 420 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 RABEP2Q9H5N1 569 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 USTQ9Y2C2 406 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 NDUFAB1O14561 156 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 CDC25AP30304 524 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 LIG3P49916 1009 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 TOB1P50616 345 aaPredicted RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 GNGT1P63211 74 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 GBP6Q6ZN66 633 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 OTUD6BQ8N6M0 293 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 COG1Q8WTW3 980 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 RRP36Q96EU6 259 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 LZTS2Q9BRK4 669 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 LTBP1Q14766 1721 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 LRRIQ3A6PVS8 624 aaPredicted RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 RPN1P04843 607 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 EEF2P13639 858 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 NDUFV2P19404 249 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 SLC1A4P43007 532 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 VAV2P52735 878 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 RASA3Q14644 834 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 SHROOM1Q2M3G4 852 aaPredicted RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 RNF187Q5TA31 235 aaPredicted RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 KCTD1Q719H9 257 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 B4GALNT4Q76KP1 1039 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 CENPHQ9H3R5 247 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 MAD2L2Q9UI95 211 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 SNED1Q8TER0 1413 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 BICDL2A1A5D9 508 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 SPDYE16A6NNV3 312 aaPredicted RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 GOLGA8KD6RF30 607 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 RPS12P25398 132 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 DNM2P50570 870 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 CORO7P57737 925 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 TNFAIP1Q13829 316 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 PKN1Q16512 942 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 LRRC31Q6UY01 552 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 TMEM179Q6ZVK1 233 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 CSGALNACT2Q8N6G5 542 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 SYT17Q9BSW7 474 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 DNAJC18Q9H819 358 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 EXOC1Q9NV70 894 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 HDAC6Q9UBN7 1215 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 LIMA1Q9UHB6 759 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 G3BP2Q9UN86 482 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 CNTNAP5Q8WYK1 1306 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 MAST2Q6P0Q8 1798 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 SCN9AQ15858 1988 aa7.72□□□□□ -1.17
SRGAP3-213ENST00000618999 ZEB2O60315 1214 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 SRGAP2O75044 1071 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 VEGFAP15692 232 aaPredicted RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 LMNB1P20700 586 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 CALML3P27482 149 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 SLC16A2P36021 539 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 GGCXP38435 758 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 NAPAP54920 295 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 FUT2Q10981 343 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 CAMK2BQ13554 666 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 ZNF658Q5TYW1 1059 aaPredicted RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 CDKAL1Q5VV42 579 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 SLFN13Q68D06 897 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 CACNA2D4Q7Z3S7 1137 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 TRIM58Q8NG06 486 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 SELENOOQ9BVL4 669 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 TIAM2Q8IVF5 1701 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms