RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 ARID5AQ03989 594 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 KLRC3Q07444 240 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 C2orf54Q08AI8 447 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 ARSHQ5FYA8 562 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 CCDC65Q8IXS2 484 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 ZDHHC15Q96MV8 337 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
TP53-223ENST00000618944 NT5C3AQ9H0P0 336 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
TP53-223ENST00000618944 CYP11B2P19099 503 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 MATR3P43243 847 aaKnown RBP eCLIP12.39□□□□□ -0.43
TP53-223ENST00000618944 NAP1L1P55209 391 aaKnown RBP12.39□□□□□ -0.43
TP53-223ENST00000618944 ZCWPW2Q504Y3 356 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
TP53-223ENST00000618944 COG1Q8WTW3 980 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 SCFD1Q8WVM8 642 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 CCDC102AQ96A19 550 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 LSM14BQ9BX40 385 aaKnown RBP12.39□□□□□ -0.43
TP53-223ENST00000618944 TSGA10Q9BZW7 698 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 SMARCAL1Q9NZC9 954 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 SALL4Q9UJQ4 1053 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 ADAM21Q9UKJ8 722 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 PCDHA2Q9Y5H9 948 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 NCK2O43639 380 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 BUB1O43683 1085 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 TACC1O75410 805 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 HOXA13P31271 388 aaPredicted RBP12.39□□□□□ -0.43
TP53-223ENST00000618944 PDE6BP35913 854 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 TNNT3P45378 269 aaPredicted RBP12.39□□□□□ -0.43
TP53-223ENST00000618944 USP11P51784 963 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 POLR2FP61218 127 aaKnown RBP12.39□□□□□ -0.43
TP53-223ENST00000618944 JAG1P78504 1218 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 ARHGAP4P98171 946 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 ICA1Q05084 483 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
TP53-223ENST00000618944 WDR93Q6P2C0 686 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 PDXDC1Q6P996 788 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 PODNQ7Z5L7 613 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 CATSPER3Q86XQ3 398 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 GSPT2Q8IYD1 628 aaKnown RBP12.39□□□□□ -0.43
TP53-223ENST00000618944 SPICE1Q8N0Z3 855 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 MASTLQ96GX5 879 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 GBP3Q9H0R5 595 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 EHD4Q9H223 541 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 MYO3BQ8WXR4 1341 aa12.39□□□□□ -0.43
TP53-223ENST00000618944 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
TP53-223ENST00000618944 GPS2Q13227 327 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
TP53-223ENST00000618944 ADAM9Q13443 819 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 HYIQ5T013 277 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 DCAF4Q8WV16 495 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 MKL1Q969V6 931 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 BCAS3Q9H6U6 928 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 TDRD3Q9H7E2 651 aaKnown RBP12.38□□□□□ -0.43
TP53-223ENST00000618944 JRKLQ9Y4A0 524 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.38□□□□□ -0.43
TP53-223ENST00000618944 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 EIF3JO75822 258 aaKnown RBP12.38□□□□□ -0.43
TP53-223ENST00000618944 NOL4O94818 638 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 CASP5P51878 434 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 SLC12A3P55017 1021 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 CYP4A11Q02928 519 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 FAM83BQ5T0W9 1011 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 NFRKBQ6P4R8 1299 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 SLC30A10Q6XR72 485 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 CREG2Q8IUH2 290 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 TRIM58Q8NG06 486 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 IQCDQ96DY2 449 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 DHX36Q9H2U1 1008 aaKnown RBP12.38□□□□□ -0.43
TP53-223ENST00000618944 EHD2Q9NZN4 543 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 NYAP2Q9P242 653 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
TP53-223ENST00000618944 FAM86B1E9PN63 330 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 ECE2O60344 883 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 NDUFB10O96000 172 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 GH2P01242 217 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 FAM86B2P0C5J1 330 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 LMAN1P49257 510 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 DNA2P51530 1060 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
TP53-223ENST00000618944 ABCB5Q2M3G0 1257 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 DACT2Q5SW24 774 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.37□□□□□ -0.43
TP53-223ENST00000618944 AMNQ9BXJ7 453 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 KCTD10Q9H3F6 313 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 ABCB11O95342 1321 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 SPDYE3A6NKU9 549 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 TLR2O60603 784 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 FAM193AP78312 1265 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 SFMBT2Q5VUG0 894 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 HGSNATQ68CP4 663 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 FBXO11Q86XK2 927 aa12.37□□□□□ -0.43
TP53-223ENST00000618944 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms