RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 DGKDQ16760 1214 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 SH3RF1Q7Z6J0 888 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 DHX37Q8IY37 1157 aaKnown RBP9.43□□□□□ -0.9
NEK3-209ENST00000618856 CYP2W1Q8TAV3 490 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 LENG9Q96B70 501 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 PGBD1Q96JS3 809 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 ZSCAN31Q96LW9 406 aaPredicted RBP9.43□□□□□ -0.9
NEK3-209ENST00000618856 MBOAT7Q96N66 472 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 AIFM3Q96NN9 605 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 CTAGE1Q96RT6 745 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 GPR20Q99678 358 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 LLPHQ9BRT6 129 aaKnown RBP9.43□□□□□ -0.9
NEK3-209ENST00000618856 C16orf70Q9BSU1 422 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 KCNH7Q9NS40 1196 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 ATP11BQ9Y2G3 1177 aa9.43□□□□□ -0.9
NEK3-209ENST00000618856 LAMA2P24043 3122 aaKnown RBP9.42□□□□□ -0.9
NEK3-209ENST00000618856 SZT2Q5T011 3432 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 CYP3A7-CYP3A51PA0A087WV96 503 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 A0A1W2PPC1 479 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 DHX15O43143 795 aaKnown RBP9.42□□□□□ -0.9
NEK3-209ENST00000618856 ARP10275 920 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 CYP3A7P24462 503 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 ITGB8P26012 769 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 USP11P51784 963 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 PSMC6P62333 389 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
NEK3-209ENST00000618856 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 BLIDQ8IZY5 108 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 TNFRSF25Q93038 417 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 SPATA33Q96N06 139 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
NEK3-209ENST00000618856 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
NEK3-209ENST00000618856 ZMYND8Q9ULU4 1186 aaPredicted RBP9.42□□□□□ -0.9
NEK3-209ENST00000618856 COLQQ9Y215 455 aaPredicted RBP9.42□□□□□ -0.9
NEK3-209ENST00000618856 TELO2Q9Y4R8 837 aa9.42□□□□□ -0.9
NEK3-209ENST00000618856 GSTTP1A0A1W2PQM5 241 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 B4GALT4O60513 344 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 JAK2O60674 1132 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 PQBP1O60828 265 aaKnown RBP9.41□□□□□ -0.9
NEK3-209ENST00000618856 ATG7O95352 703 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 MYL3P08590 195 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 SYN1P17600 705 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 MAGEA10P43363 369 aaPredicted RBP9.41□□□□□ -0.9
NEK3-209ENST00000618856 NLRP5P59047 1200 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 MOXD1Q6UVY6 613 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 CYFIP1Q7L576 1253 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 RASGRP4Q8TDF6 673 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 WASF1Q92558 559 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
NEK3-209ENST00000618856 GJB4Q9NTQ9 266 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
NEK3-209ENST00000618856 KCNJ14Q9UNX9 436 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 MYH7BA7E2Y1 1941 aa9.41□□□□□ -0.9
NEK3-209ENST00000618856 IGKV6D-21A0A0A0MT36 114 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 LGR5O75473 907 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 CD2BP2O95400 341 aaKnown RBP9.4□□□□□ -0.9
NEK3-209ENST00000618856 TIMP1P01033 207 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 LGALS2P05162 132 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 PSEN2P49810 448 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 ADAM17P78536 824 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
NEK3-209ENST00000618856 RBL2Q08999 1139 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 HIC1Q14526 733 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 Q4G0T1 1027 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 B3GNT9Q6UX72 402 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 VWCEQ96DN2 955 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 ALG1Q9BT22 464 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 KATNAL1Q9BW62 490 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 TRPV6Q9H1D0 765 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 TMEM39AQ9NV64 488 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.9
NEK3-209ENST00000618856 EMSYQ7Z589 1322 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 DOCK5Q9H7D0 1870 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 H3BRB1 525 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 TLR3O15455 904 aaKnown RBP9.39□□□□□ -0.91
NEK3-209ENST00000618856 DTNBO60941 627 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 CCNE2O96020 404 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 MMP1P03956 469 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 SUPT20HL2P0C7V6 817 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 ZNF286BP0CG31 522 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 XBP1P17861 261 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 MCM2P49736 904 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 MFSD10Q14728 455 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 KIAA0753Q2KHM9 967 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 PPP4R3AQ6IN85 833 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 MFSD5Q6N075 450 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 ABHD15Q6UXT9 468 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 TBCKQ8TEA7 893 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 SEPT1Q8WYJ6 367 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 BADQ92934 168 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 VTI1AQ96AJ9 217 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 PCYT2Q99447 389 aa9.39□□□□□ -0.91
NEK3-209ENST00000618856 NOC4LQ9BVI4 516 aaKnown RBP9.39□□□□□ -0.91
NEK3-209ENST00000618856 TUT1Q9H6E5 874 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms