RNA–Protein interactions for RNA: ENST00000618773.4

UCHL3-206, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5 BASIC

Gene UCHL3, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-206ENST00000618773 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 CLEC4DQ8WXI8 215 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 VTI1AQ96AJ9 217 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 VWCEQ96DN2 955 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 DOCK5Q9H7D0 1870 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 TTC28Q96AY4 2481 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 XIRP2A4UGR9 3374 aa12.18□□□□□ -0.46
UCHL3-206ENST00000618773 TMEM265A0A087WTH1 108 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
UCHL3-206ENST00000618773 PPFIA3O75145 1194 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
UCHL3-206ENST00000618773 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
UCHL3-206ENST00000618773 PPIGQ13427 754 aaKnown RBP eCLIP12.17□□□□□ -0.46
UCHL3-206ENST00000618773 BAATQ14032 418 aaPredicted RBP12.17□□□□□ -0.46
UCHL3-206ENST00000618773 MCMDC2Q4G0Z9 681 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
UCHL3-206ENST00000618773 PBX4Q9BYU1 374 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 TRPV6Q9H1D0 765 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 WNT8AQ9H1J5 351 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 CPVLQ9H3G5 476 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
UCHL3-206ENST00000618773 CXXC1Q9P0U4 656 aaPredicted RBP12.17□□□□□ -0.46
UCHL3-206ENST00000618773 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.16□□□□□ -0.46
UCHL3-206ENST00000618773 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.16□□□□□ -0.46
UCHL3-206ENST00000618773 RBAK-RBAKDNI3L0D1 243 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 B4GALT4O60513 344 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 ZNF543Q08ER8 600 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 ITGA7Q13683 1181 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 ZNF365Q70YC5 407 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 ARHGAP9Q9BRR9 750 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 VTA1Q9NP79 307 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 TCP11L1Q9NUJ3 509 aa12.16□□□□□ -0.46
UCHL3-206ENST00000618773 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
UCHL3-206ENST00000618773 PDXDC2PQ6P474 469 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 KIAA1211Q6ZU35 1233 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 TIFAQ96CG3 184 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 ZKSCAN3Q9BRR0 538 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
UCHL3-206ENST00000618773 HIPK3Q9H422 1215 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 ZNF576Q9H609 170 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 IL23AQ9NPF7 189 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
UCHL3-206ENST00000618773 BAZ2BQ9UIF8 2168 aaKnown RBP12.14□□□□□ -0.47
UCHL3-206ENST00000618773 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
UCHL3-206ENST00000618773 PTPDC1A2A3K4 754 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 CABYRO75952 493 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 IGHDP01880 384 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 EDNRBP24530 442 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 CALML3P27482 149 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 CCL23P55773 120 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 DUSP28Q4G0W2 176 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 IQSEC1Q6DN90 963 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 PSRC1Q6PGN9 363 aaPredicted RBP12.14□□□□□ -0.47
UCHL3-206ENST00000618773 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 TMEM199Q8N511 208 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 COPS5Q92905 334 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 RILPL2Q969X0 211 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 IL25Q9H293 177 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 PRDM6Q9NQX0 595 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 DNMT3LQ9UJW3 386 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
UCHL3-206ENST00000618773 Q9Y3F1 56 aa12.14□□□□□ -0.47
UCHL3-206ENST00000618773 WDR19Q8NEZ3 1342 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 TCF20Q9UGU0 1960 aaKnown RBP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 ARIH2O95376 493 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 CENPBP07199 599 aaPredicted RBP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 SDSP20132 328 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 RPS6P62753 249 aaKnown RBP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 PURAQ00577 322 aaKnown RBP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 PPP1R26Q5T8A7 1209 aaPredicted RBP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 B4GALNT3Q6L9W6 998 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 ZBTB33Q86T24 672 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 SCLYQ96I15 445 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 ALDH8A1Q9H2A2 487 aaPredicted RBP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
UCHL3-206ENST00000618773 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
UCHL3-206ENST00000618773 TTLL8A6PVC2 850 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 CYP2C9P11712 490 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 ADGRE1Q14246 886 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 USH1GQ495M9 461 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 RNF207Q6ZRF8 634 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 OTOP2Q7RTS6 562 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
UCHL3-206ENST00000618773 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms