RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 IPO5O00410 1097 aaKnown RBP13.2□□□□□ -0.3
PDPN-211ENST00000617617 IGHA2P01877 340 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 TGFB3P10600 412 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 GRB10Q13322 594 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
PDPN-211ENST00000617617 DEFB115Q30KQ5 88 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 MORN1Q5T089 497 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 LRCH2Q5VUJ6 765 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 CNNM3Q8NE01 707 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 KIAA1468Q9P260 1216 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 PEX10O60683 326 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 HOXC6P09630 235 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 GPR142Q7Z601 462 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 GIMAP8Q8ND71 665 aaPredicted RBP13.2□□□□□ -0.3
PDPN-211ENST00000617617 USP6NLQ92738 828 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 SERTAD1Q9UHV2 236 aa13.2□□□□□ -0.3
PDPN-211ENST00000617617 RBM47A0AV96 593 aaKnown RBP13.19□□□□□ -0.3
PDPN-211ENST00000617617 KCNA2P16389 499 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 SFNP31947 248 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 MAP2K2P36507 400 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 EPHA7Q15375 998 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 RRAGBQ5VZM2 374 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 ZNF746Q6NUN9 644 aaPredicted RBP13.19□□□□□ -0.3
PDPN-211ENST00000617617 CEP57L1Q8IYX8 460 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 TRIML1Q8N9V2 468 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 HSD17B14Q9BPX1 270 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 R3HDMLQ9H3Y0 253 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 SYCE3A1L190 88 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 POTEMA6NI47 508 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 MARCH6O60337 910 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 LYPLA2O95372 231 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 UBXN2AP68543 259 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 KRT76Q01546 638 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 ITGB3BPQ13352 177 aaPredicted RBP13.19□□□□□ -0.3
PDPN-211ENST00000617617 POSTNQ15063 836 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 PAGE5Q96GU1 130 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
PDPN-211ENST00000617617 GTPBP4Q9BZE4 634 aaKnown RBP13.19□□□□□ -0.3
PDPN-211ENST00000617617 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
PDPN-211ENST00000617617 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
PDPN-211ENST00000617617 GAS7O60861 476 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 STAT6P42226 847 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 JAK3P52333 1124 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 CT47A1Q5JQC4 288 aaPredicted RBP13.18□□□□□ -0.3
PDPN-211ENST00000617617 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 LRRC27Q9C0I9 530 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 PP2D1A8MPX8 630 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 SPATA31C1P0DKV0 1188 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 PLCG1P19174 1290 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 DPYDQ12882 1025 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 GSE1Q14687 1217 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
PDPN-211ENST00000617617 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
PDPN-211ENST00000617617 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 DHX58Q96C10 678 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 BLOC1S4Q9NUP1 217 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 MYH11P35749 1972 aa13.18□□□□□ -0.3
PDPN-211ENST00000617617 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
PDPN-211ENST00000617617 ADORA2AP29274 412 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 RAD54LQ92698 747 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 UNC45AQ9H3U1 944 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 SLC5A4Q9NY91 659 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 ZSWIM8A7E2V4 1837 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 PDE4DQ08499 809 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 LRRC15Q8TF66 581 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 GSDMAQ96QA5 445 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 MTRQ99707 1265 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 VTA1Q9NP79 307 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 COBLO75128 1261 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 ATG7O95352 703 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 XRCC6P12956 609 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDPN-211ENST00000617617 CRHR2Q13324 411 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 OLFML2BQ68BL8 750 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 SOCS4Q8WXH5 440 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 EIF2AK1Q9BQI3 630 aaKnown RBP13.17□□□□□ -0.3
PDPN-211ENST00000617617 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 KATNBL1Q9H079 304 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 IVNS1ABPQ9Y6Y0 642 aa13.17□□□□□ -0.3
PDPN-211ENST00000617617 EML1O00423 815 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 SMC2O95347 1197 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 AMPD3Q01432 767 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 KCNB1Q14721 858 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 CAMK4Q16566 473 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 CATSPER3Q86XQ3 398 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 GZF1Q9H116 711 aaPredicted RBP13.16□□□□□ -0.3
PDPN-211ENST00000617617 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 MED24O75448 989 aa13.16□□□□□ -0.3
PDPN-211ENST00000617617 CCT6AP40227 531 aaKnown RBP13.16□□□□□ -0.3
PDPN-211ENST00000617617 TYRO3Q06418 890 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms