RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 SDF4Q9BRK5 362 aa17.67■□□□□ 0.42
PCDHGC3-204ENST00000617222 TBX3O15119 743 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 DHX15O43143 795 aaKnown RBP17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 MSCO60682 206 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 ARHGAP1Q07960 439 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 LAMC2Q13753 1193 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 LHX8Q68G74 356 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 TLK2Q86UE8 772 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 GIMAP8Q8ND71 665 aaPredicted RBP17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 OR6J1Q8NGC5 347 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 CHAMP1Q96JM3 812 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 RIT2Q99578 217 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 PAK6Q9NQU5 681 aaPredicted RBP17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 TBC1D22BQ9NU19 505 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 Q9Y3F1 56 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 ATP6V1DQ9Y5K8 247 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 NFASCO94856 1347 aa17.66■□□□□ 0.42
PCDHGC3-204ENST00000617222 LRRC37A2A6NM11 1700 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 POTEFA5A3E0 1075 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 GAS7O60861 476 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 PSMD10O75832 226 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 FARP2O94887 1054 aaPredicted RBP17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 PGK1P00558 417 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 OR52Z1P0C646 297 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 TXKP42681 527 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 SP4Q02446 784 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 LRCH2Q5VUJ6 765 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 METTL7BQ6UX53 244 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 SLFN12Q8IYM2 578 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 SPATA33Q96N06 139 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 TEKT3Q9BXF9 490 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 XPNPEP3Q9NQH7 507 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 CEP131Q9UPN4 1083 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 TELO2Q9Y4R8 837 aa17.65■□□□□ 0.42
PCDHGC3-204ENST00000617222 BMP15O95972 392 aa17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 MYCNP04198 464 aaPredicted RBP17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 GJA9P57773 515 aa17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 IRX5P78411 483 aaPredicted RBP17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 ATP2C1P98194 919 aaPredicted RBP17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 AFG1LQ8WV93 481 aa17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 SPC25Q9HBM1 224 aa17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 JPH1Q9HDC5 661 aaPredicted RBP17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 SLC9A2Q9UBY0 812 aa17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 PCDHA12Q9UN75 941 aa17.64■□□□□ 0.41
PCDHGC3-204ENST00000617222 LAD1O00515 517 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 CCNE2O96020 404 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 GJB1P08034 283 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 NASPP49321 788 aaPredicted RBP17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 STK38Q15208 465 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 PTPAQ15257 358 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 EMID1Q96A84 441 aaPredicted RBP17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 TMEM106CQ9BVX2 250 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 UNC45AQ9H3U1 944 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 TTC12Q9H892 705 aaPredicted RBP17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 POLR3EQ9NVU0 708 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 CFAP45Q9UL16 551 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 SYNRGQ9UMZ2 1314 aa17.63■□□□□ 0.41
PCDHGC3-204ENST00000617222 MYADML2A6NDP7 307 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 NOP56O00567 594 aaKnown RBP17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 CTAGE5O15320 804 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 CHMP2AO43633 222 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 NCLP19338 710 aaKnown RBP17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 MARCKSP29966 332 aaPredicted RBP17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 TECP42680 631 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 ACTR2P61160 394 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 BEX3Q00994 111 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 SLC39A14Q15043 492 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 IL17AQ16552 155 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 FSCN1Q16658 493 aaKnown RBP17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 HSDL1Q3SXM5 330 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 U2AF1L4Q8WU68 220 aaKnown RBP17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 TCEAL9Q9UHQ7 104 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 VAV3Q9UKW4 847 aa17.62■□□□□ 0.41
PCDHGC3-204ENST00000617222 KIAA1217Q5T5P2 1943 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 SGPL1O95470 568 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 TFRCP02786 760 aaKnown RBP17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 PRPHP41219 470 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 KRT85P78386 507 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 KRT76Q01546 638 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 GNASQ5JWF2 1037 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 ZNF746Q6NUN9 644 aaPredicted RBP17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 DTHD1Q6ZMT9 781 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 LINC00301Q8NCQ3 95 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 KLHDC9Q8NEP7 349 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 PPTC7Q8NI37 304 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 SEPT1Q8WYJ6 367 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 GPR20Q99678 358 aa17.61■□□□□ 0.41
PCDHGC3-204ENST00000617222 GSTTP1A0A1W2PQM5 241 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 A6NJR5 290 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 YEATS4O95619 227 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 MMP3P08254 477 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 CPT1AP50416 773 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 NKX3-2P78367 333 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 PPP2R5CQ13362 524 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms