RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 IPO5O00410 1097 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 CHGBP05060 677 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 NME8Q8N427 588 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 TRIML2Q8N7C3 387 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 FAM81BQ96LP2 452 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 SERPINI1Q99574 410 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 MRPL47Q9HD33 250 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 DISC1Q9NRI5 854 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 GINS2Q9Y248 185 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 PCDHA1Q9Y5I3 950 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 SYNMO15061 1565 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 WDR91A4D1P6 747 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 MEFVO15553 781 aaPredicted RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 SPAG7O75391 227 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 TNNC2P02585 160 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 YARSP54577 528 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 GABPAQ06546 454 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 DRP2Q13474 957 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 KRT26Q7Z3Y9 468 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 DHX40Q8IX18 779 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 LRRC47Q8N1G4 583 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 TRIM55Q9BYV6 548 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 GDAQ9Y2T3 454 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 SNX24Q9Y343 169 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 WDR46O15213 610 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 SAT1P21673 171 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 STX1BP61266 288 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 VSNL1P62760 191 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 PDCD2Q16342 344 aaPredicted RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 PROSER3Q2NL68 480 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 TBCKQ8TEA7 893 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 OSBPL9Q96SU4 736 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 RIOK1Q9BRS2 568 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 VIPAS39Q9H9C1 493 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 HESX1Q9UBX0 185 aa11.52□□□□□ -0.57
CLTCL1-209ENST00000617103 POLR2MP0CAP2 368 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 TCP10Q12799 353 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 ATG16L1Q676U5 607 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 RFX6Q8HWS3 928 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 POMGNT1Q8WZA1 660 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 CCDC138Q96M89 665 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 WDR24Q96S15 920 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 SASH1O94885 1247 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 CPP00450 1065 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 TMOD1P28289 359 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 ECE1P42892 770 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 RWDD2BP57060 319 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 JDP2Q8WYK2 163 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 CHMP6Q96FZ7 201 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 CSRNP1Q96S65 589 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 CYTH2Q99418 400 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 MRPL11Q9Y3B7 192 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 MIF4GDA9UHW6 222 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 TRIM66O15016 1216 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 HDLBPQ00341 1268 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 TRIP13Q15645 432 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 GNPTABQ3T906 1256 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 RSBN1LQ6PCB5 846 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 CENPUQ71F23 418 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 NR1H3Q13133 447 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 MFSD14BQ5SR56 506 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 E4F1Q66K89 784 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 DPP8Q6V1X1 898 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 PDIK1LQ8N165 341 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 SLC17A8Q8NDX2 589 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 MAML1Q92585 1016 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 HDAC11Q96DB2 347 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 USP40Q9NVE5 1235 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 PARP3Q9Y6F1 533 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
CLTCL1-209ENST00000617103 MCF2LO15068 1137 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 CLIC2O15247 247 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PPP1R37O75864 691 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PDHA1P08559 390 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 FAM47EQ6ZV65 393 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 TRAIPQ9BWF2 469 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 LOC102724159A0A0B4J2E5 919 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 IQANK1A0A1B0GTG1 560 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 hCG_1984214I3L0E3 225 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 TOM1L1O75674 476 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 KRT1P04264 644 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 TMEM191BP0C7N4 346 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PHKG2P15735 406 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 BASP1P80723 227 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PWP2Q15269 919 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 GPATCH4Q5T3I0 446 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 ZBTB8OSQ8IWT0 167 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 ZNF713Q8N859 430 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 FAM167BQ9BTA0 163 aa11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 TAF1DQ9H5J8 278 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
CLTCL1-209ENST00000617103 PCDHB4Q9Y5E5 795 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms