RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
PCDHGA9-202ENST00000616887 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 POTECB2RU33 542 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 MFAP3LO75121 409 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 PPFIA4O75335 1185 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 BMP3P12645 472 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 IDEP14735 1019 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 KLK7P49862 253 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 DGKZQ13574 1117 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 LRRC41Q15345 812 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 FAM83BQ5T0W9 1011 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 OGFOD1Q8N543 542 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 GMCL1P1Q8NEA9 526 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 FGFBP2Q9BYJ0 223 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 MRPL44Q9H9J2 332 aaKnown RBP12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 E9PMD0 336 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 FAM86B1E9PN63 330 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 PSMA7O14818 248 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 FAM86B2P0C5J1 330 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 HNRNPH1P31943 449 aaKnown RBP12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 UBXN1Q04323 297 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 FILIP1LQ4L180 1135 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 PRR16Q569H4 304 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 HSP90B2PQ58FF3 399 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 SV2BQ7L1I2 683 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 CSGALNACT2Q8N6G5 542 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 RAD54LQ92698 747 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 AMNQ9BXJ7 453 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 PCDHA12Q9UN75 941 aa12.66□□□□□ -0.38
PCDHGA9-202ENST00000616887 NPHP3-ACAD11A0A0J9YXS1 232 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 B4DLN1 442 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 ARHGAP4P98171 946 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 CXCL9Q07325 125 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 KRT79Q5XKE5 535 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 FBXW10Q5XX13 1052 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 CCDC174Q6PII3 467 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 PPFIBP1Q86W92 1011 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 FBXO11Q86XK2 927 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 DDX12PQ92771 950 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 FAM204AQ9H8W3 233 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 ABCB6Q9NP58 842 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 FBXO28Q9NVF7 368 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.38
PCDHGA9-202ENST00000616887 CCDC189A1A4V9 331 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 LRRC10BA6NIK2 292 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 STX10O60499 249 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 UBXN2AP68543 259 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 FCHSD1Q86WN1 690 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 P2RX5Q93086 422 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.39
PCDHGA9-202ENST00000616887 PSME4Q14997 1843 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 ABL1P00519 1130 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 MYL1P05976 194 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 ERVK-24P63145 666 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 ORC2Q13416 577 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 GPR162Q16538 588 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 TMEM119Q4V9L6 283 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 LENG9Q96B70 501 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 PNKPQ96T60 521 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 ANKZF1Q9H8Y5 726 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 L1RE1Q9UN81 338 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 ASTN2O75129 1339 aaPredicted RBP12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 H7C1D1 291 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 MEIS1O00470 390 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 WNT10BO00744 389 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 CHMP4BP1P59074 171 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 ACRBPQ8NEB7 543 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 CRYGNQ8WXF5 182 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 POLD4Q9HCU8 107 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 KCNMB3Q9NPA1 279 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 KIAA1024Q9UPX6 916 aa12.64□□□□□ -0.39
PCDHGA9-202ENST00000616887 MED24O75448 989 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 STAT2P52630 851 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 STIM1Q13586 685 aa12.63□□□□□ -0.39
PCDHGA9-202ENST00000616887 PDIA5Q14554 519 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms