RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
UBXN1-218ENST00000616865 ABCB11O95342 1321 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 ARHGEF15O94989 841 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 BMP1P13497 986 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 SMARCA1P28370 1054 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 ARHGAP1Q07960 439 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 SKIV2LQ15477 1246 aaKnown RBP17.05■□□□□ 0.32
UBXN1-218ENST00000616865 PTGISQ16647 500 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 SESTD1Q86VW0 696 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 AFAP1L1Q8TED9 768 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 NECAB3Q96P71 396 aaPredicted RBP17.05■□□□□ 0.32
UBXN1-218ENST00000616865 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
UBXN1-218ENST00000616865 PRRC2BQ5JSZ5 2229 aaKnown RBP17.04■□□□□ 0.32
UBXN1-218ENST00000616865 KIF28PB7ZC32 967 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 GH1P01241 217 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 IFNAR1P17181 557 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 KCNQ1P51787 676 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 SYTL5Q8TDW5 730 aaPredicted RBP17.04■□□□□ 0.32
UBXN1-218ENST00000616865 AFG1LQ8WV93 481 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 ARNTL2Q8WYA1 636 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 PHKBQ93100 1093 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 CTAGE1Q96RT6 745 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 JMJD4Q9H9V9 463 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 COL20A1Q9P218 1284 aa17.04■□□□□ 0.32
UBXN1-218ENST00000616865 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
UBXN1-218ENST00000616865 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 KCNJ6P48051 423 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 TRAF1Q13077 416 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 LY6KQ17RY6 165 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 KRT40Q6A162 431 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
UBXN1-218ENST00000616865 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 NSUN6Q8TEA1 469 aaKnown RBP17.03■□□□□ 0.32
UBXN1-218ENST00000616865 TBC1D5Q92609 795 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 KAT2BQ92831 832 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 TAAR1Q96RJ0 339 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 PIGSQ96S52 555 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 LLPHQ9BRT6 129 aaKnown RBP17.03■□□□□ 0.32
UBXN1-218ENST00000616865 RIOX1Q9H6W3 641 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 RAPGEFL1Q9UHV5 662 aa17.03■□□□□ 0.32
UBXN1-218ENST00000616865 V9GY48 417 aaPredicted RBP17.03■□□□□ 0.32
UBXN1-218ENST00000616865 TLL1O43897 1013 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 WDR5P61964 334 aaKnown RBP17.02■□□□□ 0.32
UBXN1-218ENST00000616865 RBL2Q08999 1139 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 GPNMBQ14956 572 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 STXBP2Q15833 593 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 LRRC8DQ7L1W4 858 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 MCF2L2Q86YR7 1114 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 DHX38Q92620 1227 aaKnown RBP17.02■□□□□ 0.32
UBXN1-218ENST00000616865 IWS1Q96ST2 819 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 RNF26Q9BY78 433 aaPredicted RBP17.02■□□□□ 0.32
UBXN1-218ENST00000616865 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
UBXN1-218ENST00000616865 GTF2IRD1Q9UHL9 959 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 COG5Q9UP83 839 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
UBXN1-218ENST00000616865 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.32
UBXN1-218ENST00000616865 SIP14410 1827 aa17.02■□□□□ 0.31
UBXN1-218ENST00000616865 PNMA6FA0A0J9YX94 578 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 ZBTB5O15062 677 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 PRPF3O43395 683 aaKnown RBP17.01■□□□□ 0.31
UBXN1-218ENST00000616865 CYTH3O43739 400 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 SELPP16109 830 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
UBXN1-218ENST00000616865 GRB10Q13322 594 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 NTRK3Q16288 839 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 QRICH1Q2TAL8 776 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 SPRED2Q7Z698 418 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 FBXO11Q86XK2 927 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 FAM184AQ8NB25 1140 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 NSUN7Q8NE18 718 aaKnown RBP17.01■□□□□ 0.31
UBXN1-218ENST00000616865 WASF1Q92558 559 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 RMDN3Q96TC7 470 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 KIF3AQ9Y496 699 aa17.01■□□□□ 0.31
UBXN1-218ENST00000616865 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 LCHNA4D1U4 455 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 LPXNO60711 386 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 DEXIO95424 95 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 PARNO95453 639 aaKnown RBP17■□□□□ 0.31
UBXN1-218ENST00000616865 FUT2Q10981 343 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 CUL4AQ13619 759 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 DGKDQ16760 1214 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 CNKSR3Q6P9H4 555 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 EMID1Q96A84 441 aaPredicted RBP17■□□□□ 0.31
UBXN1-218ENST00000616865 KATNAL1Q9BW62 490 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 AMNQ9BXJ7 453 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
UBXN1-218ENST00000616865 DDX41Q9UJV9 622 aaKnown RBP17■□□□□ 0.31
UBXN1-218ENST00000616865 MRPL11Q9Y3B7 192 aaKnown RBP17■□□□□ 0.31
UBXN1-218ENST00000616865 STK36Q9NRP7 1315 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 NCOR1O75376 2440 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 JAK2O60674 1132 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 NBNO60934 754 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms